DRSC/TRiP Functional Genomics Resources

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Protein Alignment bt and palld

DIOPT Version :9

Sequence 1:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster
Sequence 2:XP_017951326.2 Gene:palld / 100144658 XenbaseID:XB-GENE-854910 Length:1668 Species:Xenopus tropicalis


Alignment Length:1475 Identity:257/1475 - (17%)
Similarity:456/1475 - (30%) Gaps:574/1475 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  7636 AVKIIDPQAASPPLIVKPLRDANCIQNHNAQFTCTINGVPKPTISWYKGAREISNGARYHMYSEG 7700
            |.|.::|.||:  ..::.||.....:....:..|...|.|.|.|.|:...:|:||....|:.|:.
 Frog   524 ANKSVNPPAAA--RFIQKLRSQEVAEGSRVKLECRATGNPLPEIRWFCEGKELSNSPDIHISSDS 586

  Fly  7701 DN-HFLNINDVFGEDADEYVCRAVN------------------------------KAGA------ 7728
            :. |.|.|.:.|.||...|.|.|.|                              |.||      
 Frog   587 NGLHTLVIAEAFEEDTGRYTCVASNCLGSDTSSAEIFVEGASSSDSESESFAFKSKQGAMPQAQK 651

  Fly  7729 KSTRATLAI-MTAPK----------LNVP------------------PRFRDTAY--------FD 7756
            |::..:|.| .::||          :::|                  |.|...|:        ..
 Frog   652 KTSSVSLTIGPSSPKCGITTAVMQPISIPVQQVRSPTSYLYQDRSKTPTFCAPAFTKELQNLTAS 716

  Fly  7757 KGENVVIKIPFTGFPKPRIHWVRDGENIESGGHYTVEVK--------ERHAVLIIRDGSHLDSGP 7813
            :|:.||::....|.|..::.|.|.|..|:....:.:..|        |....|:|.:....|:|.
 Frog   717 EGQVVVLECRVKGTPPVKVKWFRQGSEIQDSPDFRILQKKPRCASEPEEICTLVIAETFPEDAGI 781

  Fly  7814 YRITAENELGSDTAIIQVQI-SDRPDPPRFPLIESIGTESLSLSWKAPVWDGCSDITNYYVERRE 7877
            :..||.|:.||.:...|:.: |......|    .::.:|.:|                .|..::.
 Frog   782 FTCTARNDYGSVSCSAQLTVLSANNTHTR----NNVSSEEIS----------------GYDSQKP 826

  Fly  7878 HPLSSWIRVGNTRFTSMAVSGLTPGKEYDFRIFADNVYGRSDASDTSTLIKTKESVKKKPIERKW 7942
            .|||:   |.|:....|:                        :...|...:|.::..:..:|:..
 Frog   827 SPLSA---VPNSSCLEMS------------------------SKKNSECFQTSQTDSEANMEKSH 864

  Fly  7943 ------EIDANGRKLRGKADGPVKDYDSYVFDIYSKFVPQPVEISQQSVYDRYDILEEIGTGAFG 8001
                  |.::||.......:|...:.||....:.|.....||:....                  
 Frog   865 FQFYPVENNSNGLHANNGVNGDSNNVDSKYISVTSPCTFSPVKEPPP------------------ 911

  Fly  8002 VVHRCRERSTGNIFAAKFIPVSHSVEKDLIRREIDIMNQLH--------HQKLINLH-------- 8050
                              :|....::..:|::   :.||:.        .|..:.|:        
 Frog   912 ------------------VPAKPKLDTQIIQQ---LQNQIRLEQEGAVWKQGSVQLNTPPSPSFP 955

  Fly  8051 --DAFEDDDEMILILEFLSGGELFERITAEGYVMTEAEVINYMRQICEGIRHMHEQNIIHLDIKP 8113
              .:|::.:...||    :..|....:.:....|..|...||.|.         :|.|...::.|
 Frog   956 PPPSFQELEASQLI----TSPEQMNVLNSHNSPMQPASSFNYARP---------KQFIAAQNMSP 1007

  Fly  8114 EN--IMCQTRSSTNVKLIDFGLATRLDPNEVVK-------------------------------- 8144
            .:  |...:.|||:      .|.:.:.|:...|                                
 Frog  1008 TSGYISPSSGSSTS------SLPSPMSPSTPQKQFGRAPVPPFSQPFPQEGEQFWSPASSSPPPP 1066

  Fly  8145 ---ITTGTAEFA---------------------------------APEIVNREPVGFYTDMWAT- 8172
               :.:.||.::                                 ||. .::.|..|.:.|..| 
 Frog  1067 PPPVLSPTANYSVVDAFPLPPPPPPPLPVSVLSPSYSPSPSPTGRAPN-SSQSPAAFISSMLPTQ 1130

  Fly  8173 ---------GVLSYVLLSGL-------SPFAGDNDVQTLKNVKACDWDFDVESFKYISEEAKDFI 8221
                     |:...|:..|.       :..|.|.::|..|:.                       
 Frog  1131 SSPITFNELGLPKGVMPPGFPKKSSRTARIASDEEIQGTKDA----------------------- 1172

  Fly  8222 RKLLVRNKEKRMTAHECLLHPWLTGDHSAMKQEINRDRYLAYREKLRRKYEDFERFLLPIGRLSE 8286
               ::::.|:::...|.||:              |....|.|.||:.|:                
 Frog  1173 ---VIQDLERKLRFKEELLN--------------NGQPKLTYEEKMARR---------------- 1204

  Fly  8287 YSSLRKLLMEKYKIHDAVFDRRQAAPRFVIRPSSQFCYEGQSVKFYCRCIAIATPTLTWSHNNIE 8351
                             :.....||..|.|:...:   :|.:.:......::.:|          
 Frog  1205 -----------------LLGADSAATVFNIQEPEE---DGNAQEVDSLDASVESP---------- 1239

  Fly  8352 LRQSVKFMKRYVGDDYYFIINRVKLDDRGEYIIRAENHYGSREEVVFLNVQPLPKEQPRYRTEST 8416
                                    ||.:.||.:      .|.|:.:...::        ||.|.:
 Frog  1240 ------------------------LDTQKEYKV------SSFEQRLISEIE--------YRLERS 1266

  Fly  8417 PVRRR--------EPLPYTFWQEESETAPSF-TFLLRPRV---MQARDTCKLLCCLSGKPVPNVR 8469
            ||...        ||:       ::..||.| |.|...::   |.:..|||    ::|.|.|.:.
 Frog  1267 PVEESDEEVEHGDEPV-------DNGEAPQFETKLKHYKIFEGMSSTFTCK----VTGNPKPKIY 1320

  Fly  8470 WYKDGRELSK---YEYAMTHSDGVVTMEIIDCKPSDSGKYSCKATNCHGTDETDCVVIVEGEWVT 8531
            |:|||:::||   :.......||..::........|.|.|:..|.|..|.......::|:.    
 Frog  1321 WFKDGKQISKRSEHYRIQREPDGTCSLHTSASSLDDDGNYTIMAANPQGRISCTGRLMVQA---- 1381

  Fly  8532 PEQAQLAHNFLYSGDRKYIEQPIKPAPLPIVTSRQYTSSSVQNTSEPQGDKVNVSNSNSSGISN- 8595
                              :.|..:.|..|         :|..:...|:      |.|..||..| 
 Frog  1382 ------------------VNQRGRTARTP---------TSQLHVRRPR------SRSRDSGDENE 1413

  Fly  8596 ---KKKYASNSLQAPGSPSRSRSATKELILPPDDSLMCKPEFTKPLHDLTIHDGEQLILTCYVKG 8657
               ::.:..:.|||||                               ||.:.:|:...:.|.|.|
 Frog  1414 PIQERFFRPHFLQAPG-------------------------------DLIVQEGKLCRMDCKVSG 1447

  Fly  8658 DPEPQISWSKNGKSL--SSSDILDLRYKNGIATLTINEVFPEDEGVITCTATNSVGAVETKCKLT 8720
            .|.|.:||..||:.:  .:|..:.:| :||:.:|.|..|...|.|:.||.|:|..|......:|.
 Frog  1448 LPTPDLSWQLNGRPVRPDNSHKMLVR-ENGVHSLVIEPVTTRDAGIYTCVASNRAGQNSFTLELI 1511

  Fly  8721 IQPLDKNINKRKVNAGDNAPKIVSHLESRFVRDGDAVNLACRIIGAQHFDVVWLHNNKEIKPSKD 8785
            :...|.:          ..|..:..|::..|.:|..|.|.||:.|.....:.|...|:.:..|  
 Frog  1512 VAAKDAH----------KPPVFIDKLQNTGVAEGYPVRLECRVSGMPPPQIFWKKENESLTYS-- 1564

  Fly  8786 FQYTNEANIYR-------LQIAEIFPEDGGTYTCEAFNDIGESFSTCTINVTV----------PG 8833
               |...::::       |.|.....||.|.||..|.|:.|  ..:||..:.|          |.
 Frog  1565 ---TERVSMHQDNYGYLCLLIQGATKEDAGWYTVSAKNEAG--IVSCTARLDVHTQWHQQSLAPK 1624

  Fly  8834 DETKQPSFVKFPTSVSVLEGEGTTFECEIDSELLNLVWLKDGKPI 8878
            ....:||..::    :.|..:|      :|   :...:|.:..|:
 Frog  1625 TRKVRPSASRY----AALSDQG------LD---IKAAFLPEANPV 1656

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
btNP_001162825.1 I-set 9..101 CDD:254352
Ig 26..100 CDD:143165
I-set 119..210 CDD:254352
Ig 136..209 CDD:143165
I-set 228..320 CDD:254352
IGc2 242..312 CDD:197706
I-set 335..425 CDD:254352
Ig 350..423 CDD:143165
Ig 436..530 CDD:299845
I-set 438..532 CDD:254352
I-set 545..636 CDD:254352
Ig 560..633 CDD:143165
Ig 657..731 CDD:143165
I-set 746..835 CDD:254352
Ig 1496..1586 CDD:299845
IG_like 1503..1588 CDD:214653
I-set 1639..1724 CDD:254352
IG 1750..1821 CDD:214652
IGc2 1750..1806 CDD:197706
I-set 1826..1909 CDD:254352
Ig 1831..1897 CDD:299845
I-set 1914..1998 CDD:254352
Ig 2020..2095 CDD:299845
FN3 2100..2194 CDD:238020
FN3 2203..2292 CDD:238020
I-set 2311..2395 CDD:254352
Ig 2321..2395 CDD:299845
FN3 2399..2493 CDD:238020
FN3 2501..2590 CDD:238020
I-set 2602..2693 CDD:254352
Ig 2619..2693 CDD:299845
FN3 2697..2793 CDD:238020
FN3 2801..2893 CDD:238020
I-set 2902..2995 CDD:254352
Ig 2919..2993 CDD:299845
FN3 2999..3088 CDD:238020
FN3 3102..3191 CDD:238020
I-set 3208..3292 CDD:254352
Ig 3219..3292 CDD:299845
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:254352
Ig 3516..3590 CDD:299845
FN3 3594..3682 CDD:238020
FN3 3694..3781 CDD:238020
I-set 3795..3885 CDD:254352
Ig 3813..3885 CDD:299845
FN3 3889..3980 CDD:238020
FN3 3990..4082 CDD:238020
I-set 4090..4181 CDD:254352
Ig 4108..4181 CDD:299845
FN3 4185..4271 CDD:238020
FN3 4285..4383 CDD:238020
Ig 4404..4480 CDD:299845
FN3 4484..4571 CDD:238020
FN3 4584..4677 CDD:238020
I-set 4685..4775 CDD:254352
Ig 4703..4775 CDD:299845
FN3 4779..4863 CDD:238020
FN3 4879..4970 CDD:238020
IG 4989..5069 CDD:214652
Ig 4996..5069 CDD:299845
FN3 5073..5166 CDD:238020
FN3 5175..5265 CDD:238020
I-set 5276..5366 CDD:254352
Ig 5293..5366 CDD:299845
FN3 5370..5462 CDD:238020
FN3 5470..5561 CDD:238020
Ig 5559..5654 CDD:299845
I-set 5570..5660 CDD:254352
FN3 5664..5755 CDD:238020
FN3 5764..5853 CDD:238020
I-set 5865..5954 CDD:254352
Ig 5882..5954 CDD:299845
FN3 5958..6049 CDD:238020
FN3 6062..6153 CDD:238020
I-set 6173..6255 CDD:254352
Ig_Titin_like 6182..6255 CDD:143225
FN3 6259..6350 CDD:238020
FN3 6359..6451 CDD:238020
FN3 6470..6552 CDD:238020
I-set 6564..6650 CDD:254352
Ig_Titin_like 6577..6650 CDD:143225
FN3 6654..6745 CDD:238020
FN3 6754..6840 CDD:238020
I-set 6855..6946 CDD:254352
Ig 6874..6946 CDD:299845
FN3 6950..7042 CDD:238020
FN3 7050..7139 CDD:238020
FN3 7151..7237 CDD:238020
I-set 7254..7334 CDD:254352
Ig 7272..7339 CDD:143165
IG_like 7354..7440 CDD:214653
Ig 7366..7440 CDD:299845
FN3 7444..7531 CDD:238020