DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and HDG1

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_191674.1 Gene:HDG1 / 825287 AraportID:AT3G61150 Length:808 Species:Arabidopsis thaliana


Alignment Length:345 Identity:73/345 - (21%)
Similarity:133/345 - (38%) Gaps:73/345 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 LSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVATEDIHLKKELDGHQSD 438
            ||:.|.::..:.::|.......::|.|.|.|.....| |:|.|.|..::...    :.::.:.|.
plant    17 LSDAPYNNHFSFSAVDTMLGSAAIAPSQSLPFSSSGL-SLGLQTNGEMSRNG----EIMESNVSR 76

  Fly   439 ETGSGEGENSNGGASN---IGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFA 500
            ::..||...|...:.|   :...:.|.:...||:|.:.:|  .|..||..||..|:...:||...
plant    77 KSSRGEDVESRSESDNAEAVSGDDLDTSDRPLKKKKRYHR--HTPKQIQDLESVFKECAHPDEKQ 139

  Fly   501 RERLAGKIGLPEARIQVWFSNRRAKWRRE-EKLRNQRRTPNSTGASATSSSTSATASLTDSPNSL 564
            |..|:.::.|...:::.||.|||.:.:.: |:..|......:....|.:.|..            
plant   140 RLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVR------------ 192

  Fly   565 SACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIPHIRPSCTSDNDNGR 629
            .|..:.:.|:.|||:|                      .|..|.|.    .|:|      .:|.|
plant   193 EAMRNPMCGNCGGPAV----------------------IGEISMEE----QHLR------IENSR 225

  Fly   630 QSEDCRRVCSPCPLGVGGHQNTHHIQSN-----------------GHAQGHALVPAISPRLNFNS 677
            ..::..|||:.....:|....:|||..:                 |......|:|..|||...::
plant   226 LKDELDRVCALTGKFLGRSNGSHHIPDSALVLGVGVGSGGCNVGGGFTLSSPLLPQASPRFEISN 290

  Fly   678 GSFGAMYSNMH-HTALSMSD 696
            |:...:.:.:: ...:|:||
plant   291 GTGSGLVATVNRQQPVSVSD 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeodomain 473..528 CDD:459649 17/54 (31%)
HDG1NP_191674.1 COG5576 69..185 CDD:227863 28/117 (24%)
Homeodomain 111..166 CDD:459649 18/56 (32%)
START_ArGLABRA2_like 314..537 CDD:176884
Blue background indicates that the domain is not in the aligned region.

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