DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and hmx1

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001106998.1 Gene:hmx1 / 797503 ZFINID:ZDB-GENE-080204-54 Length:282 Species:Danio rerio


Alignment Length:248 Identity:57/248 - (22%)
Similarity:86/248 - (34%) Gaps:78/248 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 QQQSWPPRHYS--GSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRN 418
            ::.|..||..|  .|.|..|..:.|::|.|....|....||                        
Zfish    81 RETSRSPREESRNSSEYSRSDRDTPLASEPLDGVVDRKMSG------------------------ 121

  Fly   419 CPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQI 483
            |.|...|       |..|..:..||...:..|.|                || ::.||.|:..|:
Zfish   122 CAVDEGD-------DARQLFDERSGPDTSEPGSA----------------RK-KKTRTVFSRSQV 162

  Fly   484 DSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRRE------------------- 529
            ..||..|:...|.....|..||..:.|.|.::::||.|||.||:|:                   
Zfish   163 FQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAADLEAVNFNHNSQRIVR 227

  Fly   530 -EKLRNQRRTPNSTGASATSS--------STSATASLTDSPNSLSACSSLLSG 573
             ..|.:.:.||.||.:...|.        |.|....|:...:|::..:|.::|
Zfish   228 VPILYHDKATPMSTLSFNVSQVSPPLMGFSNSVNYPLSSFAHSVNLMTSQMTG 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 19/51 (37%)
hmx1NP_001106998.1 Homeobox 153..206 CDD:278475 19/52 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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