DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and phox2ba

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001139175.1 Gene:phox2ba / 795258 ZFINID:ZDB-GENE-090313-51 Length:155 Species:Danio rerio


Alignment Length:176 Identity:58/176 - (32%)
Similarity:84/176 - (47%) Gaps:37/176 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 KRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKL 532
            :||.:|.||.||:.|:.:||:.|..|.|||::.||.|..:|.|.|||:||||.|||||:|::|:.
Zfish    10 RRKQRRVRTIFTSAQLKALERAFAHTQYPDIYTREELVQEIQLTEARVQVWFQNRRAKFRKQERA 74

  Fly   533 RNQRRTPNSTGASATSSSTSATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVN 597
            .:...:.:.| .|:.|..:|.|||.|| |:                              ||..:
Zfish    75 ASWNESSSKT-HSSPSHDSSETASATD-PD------------------------------STQPS 107

  Fly   598 APTLG-AGIDSSESPTP--IPHI--RPSCTSDNDNGRQSEDCRRVC 638
            .|.:| ...||.:.|.|  :|.:  ..|..:....|.|......||
Zfish   108 LPLIGDQKQDSRDRPPPEELPLLLGLTSLEAQRQRGHQIPCVDSVC 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 29/51 (57%)
phox2baNP_001139175.1 Homeobox 17..69 CDD:278475 29/51 (57%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.