DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and Nkx1-1

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:601 Identity:127/601 - (21%)
Similarity:189/601 - (31%) Gaps:228/601 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LGTAGGSGLGGIAGKPSPTMEAVEASTASHPHSTSSYFATTYYHLTDDECHSGVNQLGGVFVGGR 112
            :.|:|.:..|.:...|.|............|.:|:.                      ....|..
Mouse     1 MSTSGPAAPGDVPALPPPPPGPGSGPAPPAPAATAR----------------------DTMDGRA 43

  Fly   113 PLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATAEVV 177
            .||...|..:..||.|...|.       |..|           .|:.||.|    .||..:..|:
Mouse    44 ELPIFPRAGVPPLAASDTVPA-------VPEG-----------AGAARPAA----PPRPTSFSVL 86

  Fly   178 -----SKISQYKREC-------PSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQ 230
                 :|.:..:|.|       |:..|      ......|.  .:|:.|.     |:..|:.|::
Mouse    87 DILDPNKFNSRRRRCVLLGPVVPATCA------PCAPAACV--AVPAASG-----RSPRAELERR 138

  Fly   231 ----STG----SGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESG 287
                :||    :|:..||||:|..|                                  :.:|:.
Mouse   139 ALSAATGVAAAAGAEPTSAGDSYRA----------------------------------DEAEAN 169

  Fly   288 GASNSGEG------SEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVH 346
            |.| ||.|      ||.||..:                |....||.|                  
Mouse   170 GYS-SGSGRSPTADSEDEAPED----------------EDEEEAPEV------------------ 199

  Fly   347 GNHQALQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLA 411
                   |..|.:..||..||......      |..|..|.|.|           ||   ::..|
Mouse   200 -------QDAQGTEEPRGGSGGLGARG------SGCPGAAEVEA-----------SP---VDDTA 237

  Fly   412 SIGHQRNCPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARL---ILKRKLQR 473
            :.|.:.|.|.|          .|..:..||:|...::..||:  ..|:..:.|.   ....|.:|
Mouse   238 APGPRGNSPGA----------PGPPATATGAGSAGSTPQGAA--VTTKPKRKRTGSDSKSGKPRR 290

  Fly   474 NRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRT 538
            .||:||.:|:.:||.:|:.|.|..|..|..||..:.|.|.::::||.|||.||:::         
Mouse   291 ARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ--------- 346

  Fly   539 PNSTGASATSSSTSATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGA 603
              :.||.            |.:|          :|..|||......|...|..||....:|.:||
Mouse   347 --NPGAD------------TSAP----------TGGGGGPGPGAGPGAGLPGGLSPLSPSPPMGA 387

  Fly   604 GIDSSESPTPIPHIRP 619
            .: :...|...|...|
Mouse   388 PL-ALHGPAGYPAHSP 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 25/134 (19%)
Homeobox 475..527 CDD:278475 22/51 (43%)
Nkx1-1NP_035450.1 Homeobox 292..344 CDD:278475 22/51 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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