DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and SHOX2

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_003021.3 Gene:SHOX2 / 6474 HGNCID:10854 Length:355 Species:Homo sapiens


Alignment Length:440 Identity:93/440 - (21%)
Similarity:135/440 - (30%) Gaps:238/440 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly   441 GSGEGENSNGGAS-----NIGNTE--------------------DDQARLIL------------- 467
            |.|.|..:.||.|     ::|..|                    :.||.|:|             
Human    80 GGGAGGGAGGGRSPVRELDMGAAERSREPGSPRLTEGRRKPTKAEVQATLLLPGEAFRFLVSPEL 144

  Fly   468 ----------------KRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQ 516
                            |.|.:|:||:||.:|::.||:.|:.|||||.|.||.|:.::||.|||:|
Human   145 KDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 209

  Fly   517 VWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTSATASLTDSPNSLSACSSLLSGSAGGPSVS 581
            |||.|||||.|::|                               |.|.  ..:|.|:|.     
Human   210 VWFQNRRAKCRKQE-------------------------------NQLH--KGVLIGAAS----- 236

  Fly   582 TINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIPHIRPSCTSDNDNGRQSEDCRRVCSPCPLGVG 646
                                                            |.|.||           
Human   237 ------------------------------------------------QFEACR----------- 242

  Fly   647 GHQNTHHIQSNGHAQGHALVPAISPRLNFNSGSFGAMYSNMHHTALSM---SDSYGAVTPIPSFN 708
                                  ::|.:|..              ||.|   .||:..|||: ||.
Human   243 ----------------------VAPYVNVG--------------ALRMPFQQDSHCNVTPL-SFQ 270

  Fly   709 HSAVGPLAPPSPIPQQGDLTPSSLYPCHMTLRPPPMAPAHHHIVPGDGGRPAGVGLGSGQSANLG 773
                          .|..|...|           .:|.||||:.|                 :|.
Human   271 --------------VQAQLQLDS-----------AVAHAHHHLHP-----------------HLA 293

  Fly   774 ASCSGSGYEVLSA--YALPPPPMASSSAADSSFSAASSASANVTPHHTIA 821
            |.   :.|.:..|  :.||...:|:.||:.:|..||::|:...:.:.:||
Human   294 AH---APYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIA 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeodomain 473..528 CDD:459649 32/54 (59%)
SHOX2NP_003021.3 Homeodomain 165..221 CDD:459649 32/55 (58%)
OAR 335..351 CDD:461067 2/6 (33%)
Blue background indicates that the domain is not in the aligned region.

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