DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and pax6b

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:XP_005168876.1 Gene:pax6b / 60639 ZFINID:ZDB-GENE-001031-1 Length:450 Species:Danio rerio


Alignment Length:599 Identity:249/599 - (41%)
Similarity:288/599 - (48%) Gaps:218/599 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQ-------------VSNGCVSKI 149
            ||||||||||||.||||||||||||||||||||||||||||||             |||||||||
Zfish    24 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDDAKVQLDNKNVSNGCVSKI 88

  Fly   150 LGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVS 214
            ||||||||||||||||||||||||.|||.||:|||||||||||||||||||.|.|||||||||||
Zfish    89 LGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVS 153

  Fly   215 SINRVLRNLAAQKEQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTAT 279
            ||||||||||::|:|.                                                 
Zfish   154 SINRVLRNLASEKQQM------------------------------------------------- 169

  Fly   280 PLNSSESGGASNSGEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQL 344
                    ||         :.:|:|||:||                   |||    ||..:.|  
Zfish   170 --------GA---------DGMYDKLRMLN-------------------GQS----GTWGTRP-- 192

  Fly   345 VHGNHQALQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIES 409
                                   .|||.       :|.|                  ..||.   
Zfish   193 -----------------------GWYPG-------TSVP------------------GQPNQ--- 206

  Fly   410 LASIGHQRNCPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRN 474
                                   ||.|..:.|   |||:|..:||..::::.|.||.||||||||
Zfish   207 -----------------------DGCQQQDNG---GENTNSISSNGEDSDETQMRLQLKRKLQRN 245

  Fly   475 RTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTP 539
            |||||.:||::||||||||||||||||||||.||.||||||||||||||||||||||||||||..
Zfish   246 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 310

  Fly   540 NSTGASATSSSTSATASLTDSPNSLSACSSLLSGSAGGPS---VSTINGLSSPSTLSTNVNAPTL 601
            :::.:....||:..|:.....|...:..|.......|.|.   .:|..||....:.:...|.|  
Zfish   311 SNSSSHIPISSSFNTSVYQAIPQPTTPVSFTTGSMLGRPDTALTNTYTGLPPMPSFTMANNLP-- 373

  Fly   602 GAGIDSSESPTPIPHIRPSCTSDNDNGRQSEDCRRVCSP----------CPLGVGGHQNTHHIQS 656
                           ::||.||       |..|....||          .|..:..|.|:..:.:
Zfish   374 ---------------MQPSQTS-------SYSCMLPSSPSVNGRSFDTYTPPHMQAHMNSQTMAT 416

  Fly   657 NGHAQGHALVPAIS 670
            :|.|....:.|.:|
Zfish   417 SGTASTGLISPGVS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 116/135 (86%)
Homeobox 475..527 CDD:278475 45/51 (88%)
pax6bXP_005168876.1 PAX 23..160 CDD:128645 116/135 (86%)
Homeobox 246..298 CDD:306543 45/51 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 240 1.000 Domainoid score I2213
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1152885at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.910

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