DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and pax2b

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:XP_073773984.1 Gene:pax2b / 60638 ZFINID:ZDB-GENE-001030-4 Length:401 Species:Danio rerio


Alignment Length:669 Identity:180/669 - (26%)
Similarity:253/669 - (37%) Gaps:297/669 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPR 162
            |.||||||||||.||||||..||:||||||.|.|||||||.|:||:||||||||||||||||:|.
Zfish    16 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPG 80

  Fly   163 AIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQK 227
            .||||||:|||.:||.||:.|||:.|::||||||||||.|.:|.||.:||||||||::|....|.
Zfish    81 VIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQP 145

  Fly   228 EQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNS 292
            ...|. .|:|.::.|::|                            :..||:|..||.|.     
Zfish   146 FHPSP-DGTSLSTPGHTI----------------------------IPSTASPPVSSSSN----- 176

  Fly   293 GEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQ 357
                                       :|.                                   
Zfish   177 ---------------------------DPV----------------------------------- 179

  Fly   358 QSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVA 422
                     ||:....:..||.|:                                |.:|     
Zfish   180 ---------GSYSINGILGIPRSN--------------------------------GEKR----- 198

  Fly   423 TEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLE 487
                  |::.||.:    ||.:..:|.|...:            |::.|:.:  :||..|:::|:
Zfish   199 ------KRDADGSE----GSAQSSDSQGSVES------------LRKHLRAD--AFTQQQLEALD 239

  Fly   488 KEFERTHYPDVF-----ARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASAT 547
            :.|||..:||||     .:...|.:..||..                           :||....
Zfish   240 RVFERPVFPDVFPTSEHIKPEQASEYSLPAL---------------------------NTGLDEV 277

  Fly   548 SSSTSATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPT 612
            ..|.|:           ||.|.|      |.|||.    |.|           :|..:.::..|.
Zfish   278 KPSLSS-----------SAASDL------GASVSQ----SYP-----------VGRDMANTTLPG 310

  Fly   613 PIPHIRPSCTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHIQSNGHAQGHALVPAISPRLNFNS 677
            ..||:.|:                       |.|.:..             :.:..:.|...|: 
Zfish   311 YPPHVPPT-----------------------GQGSYAT-------------STLAGMVPGSEFS- 338

  Fly   678 GSFGAMYSNMHHTALSMSDSYGAVTPIPSFNHSAV--GPLAPPS---PIPQQGDLTPSSLYPCHM 737
               |..||:..:|  :.::::       .|::.|:  .|.|||.   |:|    :|.:|.:...|
Zfish   339 ---GNPYSHPQYT--TYNEAW-------RFSNPAILMHPEAPPPQLLPLP----MTATSYHANQM 387

  Fly   738 TLRPPPMAPAHH---HIVP 753
            |..      ||.   ||:|
Zfish   388 TRH------AHQLGLHILP 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 92/122 (75%)
Homeodomain 473..528 CDD:459649 14/59 (24%)
pax2bXP_073773984.1 None

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