DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and pax2b

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_571715.1 Gene:pax2b / 60638 ZFINID:ZDB-GENE-001030-4 Length:386 Species:Danio rerio


Alignment Length:554 Identity:159/554 - (28%)
Similarity:216/554 - (38%) Gaps:232/554 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPR 162
            |.||||||||||.||||||..||:||||||.|.|||||||.|:||:||||||||||||||||:|.
Zfish    16 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPG 80

  Fly   163 AIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQK 227
            .||||||:|||.:||.||:.|||:.|::||||||||||.|.:|.||.:||||||||::|....|.
Zfish    81 VIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQP 145

  Fly   228 EQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNS 292
            ...|. .|:|.::.|::|                            :..||:|..||.|.     
Zfish   146 FHPSP-DGTSLSTPGHTI----------------------------IPSTASPPVSSSSN----- 176

  Fly   293 GEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQ 357
                                       :|.                                   
Zfish   177 ---------------------------DPV----------------------------------- 179

  Fly   358 QSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVA 422
                     ||:....:..||.|:                                |.:|     
Zfish   180 ---------GSYSINGILGIPRSN--------------------------------GEKR----- 198

  Fly   423 TEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLE 487
                  |::.||.:    ||.:..:|.|...:            |::.|:.:  :||..|:::|:
Zfish   199 ------KRDADGSE----GSAQSSDSQGSVES------------LRKHLRAD--AFTQQQLEALD 239

  Fly   488 KEFERTHYPDVF-----ARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASAT 547
            :.|||..:||||     .:...|.:..||..                           :||....
Zfish   240 RVFERPAFPDVFPTSEHIKPEQASEYSLPAL---------------------------NTGLDEV 277

  Fly   548 SSSTSAT------ASLTDS-PNSLSACSSLLSG--------SAGGPSVSTINGLSSPSTLSTNVN 597
            ..|.|::      ||::.| |......::.|.|        ..|....||:.|:...|..|.|  
Zfish   278 KPSLSSSAASDLGASVSQSYPVGRDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGN-- 340

  Fly   598 APTLGAGIDSSESPTPIPHIRPSCTSDNDNGRQS 631
                             |:..|..|:.|:..|.|
Zfish   341 -----------------PYSHPQYTTYNEAWRFS 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 92/122 (75%)
Homeobox 475..527 CDD:278475 14/56 (25%)
pax2bNP_571715.1 PAX 15..139 CDD:128645 92/122 (75%)
Pax2_C 290..384 CDD:289189 19/87 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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