DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and pax8

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:XP_001339893.5 Gene:pax8 / 60637 ZFINID:ZDB-GENE-001030-3 Length:448 Species:Danio rerio


Alignment Length:688 Identity:183/688 - (26%)
Similarity:252/688 - (36%) Gaps:282/688 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPR 162
            |.|:|||||:||.|||||:..||:||::||.|.|||||||.|:||:||||||||||||||||:|.
Zfish     9 HGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPG 73

  Fly   163 AIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQK 227
            .||||||:|||.:||.||::|||:.|::||||||||||.|.||..|.:||||||||::|.    |
Zfish    74 VIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDGDTVPSVSSINRIIRT----K 134

  Fly   228 EQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNS 292
            .||                                                 |.|.         
Zfish   135 VQQ-------------------------------------------------PFNL--------- 141

  Fly   293 GEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQ 357
                                     ||:..      |.||.|....||          |:...:.
Zfish   142 -------------------------PLDTK------GLSPGHTLIPSS----------AVTPPES 165

  Fly   358 QSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVA 422
               |.....||.|          |...:..:|...:.....|..|            .|.:|   
Zfish   166 ---PQSDSLGSTY----------SINGLLGITQTTADGKRGHDDS------------DQESC--- 202

  Fly   423 TEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLE 487
                       .|..|..|||      |||.....||                 .|.:..:|.  
Zfish   203 -----------RHSVDSQGSG------GGARKQLRTE-----------------HFPSAALDC-- 231

  Fly   488 KEFERTHYPDVFARERLAGKI--------GLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGA 544
             .|||.:..|.|::.:...::        ||.|.:                            ||
Zfish   232 -GFERHYSSDSFSQSKAEQQLYPLALMNPGLDEGK----------------------------GA 267

  Fly   545 SATSSSTSA-------TASLTDSP-----------NSLSACSSLLSGSAGGPSVSTINGLSSPST 591
            |:.|.:.:|       |.:|...|           ||||....::||||    ...::.:||||:
Zfish   268 SSISRNLAAHQGYAVVTEALQPLPLCLKQEVSPEVNSLSPSPHIISGSA----FLDLSAISSPSS 328

  Fly   592 --LSTNVNAPTLGAGIDSSESPTPIPHIRPSCTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHI 654
              ::::..:..|..|..|.....|:            :|:.|       ||..:.          
Zfish   329 APVASSCGSAHLSHGFSSFSHHAPV------------HGQFS-------SPSLMA---------- 364

  Fly   655 QSNGHAQGHALVPAISPRL-----NFNSGSFGAMYSNMHHTALSMS-DSYGAVTPIPSFNHSAVG 713
               |.....:::|...|.:     .|:|.:...|.|...:|..|.| .:|.:.:....|.:|:: 
Zfish   365 ---GREVASSMLPGYPPHIPTAQTGFSSSTIAGMVSAPEYTGQSYSHPAYSSYSEAWRFTNSSI- 425

  Fly   714 PLAPPSPIPQQGDLTPSSLYPCHMTLRPPPMAPAHHHI 751
             |..|              |......||||.|.|:.|:
Zfish   426 -LGSP--------------YYYSSATRPPPPAAAYDHL 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 87/122 (71%)
Homeobox 475..527 CDD:278475 10/59 (17%)
pax8XP_001339893.5 PAX 8..132 CDD:128645 87/122 (71%)
Pax2_C 343..437 CDD:289189 23/141 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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