DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and pax5

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:XP_005170979.1 Gene:pax5 / 60636 ZFINID:ZDB-GENE-001030-2 Length:423 Species:Danio rerio


Alignment Length:487 Identity:163/487 - (33%)
Similarity:232/487 - (47%) Gaps:115/487 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPR 162
            |.||||||||||.||||||..||:||||||.|.|||||||.|:||:||||||||||||||||||.
Zfish    17 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPG 81

  Fly   163 AIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQK 227
            .||||||:|||.:||.||:.|||:.|::||||||||||.|.||.||::||||||||::|.    |
Zfish    82 VIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVPSVSSINRIIRT----K 142

  Fly   228 EQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSE------- 285
            .||..|. |.:.||.| :::.|:|:   .||.|.|.:.|:..|.:.::..::|.::|:       
Zfish   143 VQQPPGQ-SGAVSAHN-LASTVAVT---QVSAVTSDAAGSSYSISGILGISSPADASKRKRDDPL 202

  Fly   286 -----SGGASNSGEGSEQEAIYEKLRLLNTQHAAGPGPL-EPARAAPLVGQSPNHLGTRSSHPQL 344
                 :.|.|:||    ::.:.:::|          |.| .|.:...|     :|:..|...|.:
Zfish   203 QDSPLANGHSHSG----RDFLRKQMR----------GELFTPQQLEVL-----DHVFDRQPFPDI 248

  Fly   345 VHGNHQALQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLA-------HSLS 402
                                     ||     ||.|.:...:..|.|::..|||       :||:
Zfish   249 -------------------------YP-----IPDSISYKPSQTTDYSAMASLAGGLEEMKNSLA 283

  Fly   403 PPNDIESLASIGHQRNCPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLIL 467
            .....|..:::...::.|:.:........|.|:......:|:|..|....:.:....|.......
Zfish   284 NQTGAELGSTVAGPQSYPLVSGRDLASTTLPGYPPHVPPTGQGSYSTPSLTGMVPGGDFSGSPYS 348

  Fly   468 KRKLQRNRTS--FTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREE 530
            ..:......|  |.|..:...::|     |..:...||.|.....|                   
Zfish   349 HPQYSTYNESWRFANPSLLVFQQE-----YGSLLGSERAASSGLFP------------------- 389

  Fly   531 KLRNQRRTPNSTG------ASATSSSTSATAS 556
                 .:||..||      |:...:.|:|||:
Zfish   390 -----GQTPQPTGSPYYYSAATRGAGTAATAT 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 94/122 (77%)
Homeobox 475..527 CDD:278475 9/53 (17%)
pax5XP_005170979.1 PAX 16..140 CDD:128645 94/122 (77%)
Pax2_C 280..403 CDD:289189 23/151 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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