DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and hoxb6b

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_571613.1 Gene:hoxb6b / 58053 ZFINID:ZDB-GENE-000823-7 Length:224 Species:Danio rerio


Alignment Length:210 Identity:53/210 - (25%)
Similarity:80/210 - (38%) Gaps:56/210 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 PRHYSGSWYPTSLSEIPISS--APNIAS---VTAY---------ASGPSLAHSLSPPNDIESLAS 412
            |.:.||  |..||...|.::  |.|:..   .::|         .||.:.|...|.||...|.  
Zfish    26 PLYSSG--YTDSLRHYPSATFGATNVQDKVYTSSYYQQAGGVFGRSGSTSACDYSTPNIYRSA-- 86

  Fly   413 IGHQRNCPVATEDIHLKKELDGHQSDETGSG-------------------EGENS-NGGASNIGN 457
               .|:|.:.:.:..|....|..::|.|..|                   :..|| ||...:.| 
Zfish    87 ---DRSCAIGSLEDSLVLTQDQCKTDCTEQGTERYFSTEDKPCTPVYPWMQRMNSCNGMPGSTG- 147

  Fly   458 TEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 522
                          :|.|.::|..|...|||||....|.....|..::..:.|.|.:|::||.||
Zfish   148 --------------RRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNR 198

  Fly   523 RAKWRREEKLRNQRR 537
            |.||::|.|..|..:
Zfish   199 RMKWKKENKAVNSAK 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 19/51 (37%)
hoxb6bNP_571613.1 Antp-type hexapeptide 129..134 0/4 (0%)
Homeobox 151..203 CDD:278475 19/51 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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