DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and Drgx

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster


Alignment Length:516 Identity:136/516 - (26%)
Similarity:187/516 - (36%) Gaps:193/516 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 LKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEK 531
            ::||.:||||:||..|::.||..|.:|||||||.||.||.||.|.|||:||||.|||||||:.|:
  Fly    48 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAER 112

  Fly   532 LRNQRRTPNSTGASATS---------SSTSATASLTD---------------------------- 559
            |::::| ....|.|::|         ||...|..:.|                            
  Fly   113 LKDEQR-KRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQHSHSH 176

  Fly   560 -----------------------SPNSL-----SACSSLLSGSAGGPSVSTIN------------ 584
                                   |.|.|     ||..||.|.|||.||.|.::            
  Fly   177 SHSHSRSPGGGMHLDSSDNERPLSSNQLTATPHSASQSLGSISAGSPSPSGMHREREHTPLVGGG 241

  Fly   585 --GLSSPSTLSTNVNAP-------------TLGAGIDSSESPTPIPHIRPSCTSDNDNGRQSEDC 634
              |.||||. |.|.::|             .:.|..::|.|.||.|                   
  Fly   242 GQGPSSPSN-SRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPTP------------------- 286

  Fly   635 RRVCSPCPLGVGGHQNTHHIQSNGHAQGHALVPAISPRL--NFNSGSFGAMYSNMHHTALSMSDS 697
                           .|.|.....|:.. |...|....:  ||..||             :.|||
  Fly   287 ---------------TTPHAPQMPHSSA-AAAAAFGSHIFGNFGGGS-------------NASDS 322

  Fly   698 YGAVTPIPSFNHSAVGPLAPPSPIPQQGDLTPSSLYPCHMTLRPPPMAPAHHHIVPGDGGRPAGV 762
            .....|:.| ..|||...|..:...:..:..|..|        ||.:|....|       :|...
  Fly   323 NCGFRPVLS-EQSAVAAAAAAAAAQRSANHPPLFL--------PPHLAAQFTH-------QPLFP 371

  Fly   763 GL-GSGQSANLGASCSGSGYEVLSAYALPPPPMASSSAADSSFSAASSASANVTPHHTIAQESCP 826
            || |.....:|.:.||          ..||||..||..|..|...:||::|:          |..
  Fly   372 GLKGVSPFQSLCSCCS----------LKPPPPPGSSVVAPLSIPVSSSSAAS----------SPE 416

  Fly   827 SPCSSASHFGVAHSSGFSSDPISPAVSSYAHMSYNY-ASSANTMTPSSASGTS---AHVAP 883
            ||.||..  |..|      ||.|.:|:.....:..: |:...::..::|:|.:   .|:.|
  Fly   417 SPKSSGQ--GSVH------DPRSNSVAELRRKAQEHSAALLQSLHAAAAAGLAFPGLHLPP 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 34/51 (67%)
DrgxNP_001097075.2 Homeobox 56..108 CDD:278475 34/51 (67%)
OAR 428..445 CDD:281777 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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