DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and pax7b

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001139621.1 Gene:pax7b / 566533 ZFINID:ZDB-GENE-080917-54 Length:510 Species:Danio rerio


Alignment Length:805 Identity:199/805 - (24%)
Similarity:281/805 - (34%) Gaps:368/805 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIG 165
            ||||||||:.|||||:..|.||||:||.|.|||.|||.|:||:|||||||.||.|||||||.|||
Zfish    38 VNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIG 102

  Fly   166 GSKPR-----VATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP-----SVSSINRVL 220
            |||||     |||.:|..:|.:||||.|.:|:|||||:||::.||....:|     |||||:|||
Zfish   103 GSKPRQTQKQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASSVSSISRVL 167

  Fly   221 RNLAAQKEQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSE 285
            |....:|:.:........|.     ..|...||.|.:     |.:|.:...:|            
Zfish   168 RARFGKKDDEDDCDKKDDTG-----EKKTKHSIDGIL-----GDKGRMDEVSD------------ 210

  Fly   286 SGGASNSGEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQ 350
                                                                             
Zfish   211 ----------------------------------------------------------------- 210

  Fly   351 ALQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGH 415
                                        :.|.|:                               
Zfish   211 ----------------------------VESEPD------------------------------- 216

  Fly   416 QRNCPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTN 480
                                                             |.||||.:|:||:||.
Zfish   217 -------------------------------------------------LPLKRKQRRSRTTFTA 232

  Fly   481 DQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGAS 545
            :|::.|||.||||||||::.||.||.:..|.|||:|||||||||:||::            .|| 
Zfish   233 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ------------AGA- 284

  Fly   546 ATSSSTSATASLTDSPNSLSACSSLLSGS---AGGPSVST--INGLSSPSTLSTNVNAPTLGAGI 605
                            |.|:|.:.||.|.   .|.|::.|  :...|.|:|        ||...:
Zfish   285 ----------------NQLAAFNHLLPGGFPPTGMPTLPTYQLPESSYPTT--------TLPQDV 325

  Fly   606 DSS-ESPTPIPHIRPSCTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHIQSNGHAQGHALVPAI 669
            ..: ..|.|:|   ||  :.:..|..|:.               .:.:.:.||.|:         
Zfish   326 SGTVHRPQPLP---PS--TMHQGGLSSDS---------------SSAYGLSSNRHS--------- 361

  Fly   670 SPRLNFNSGSFGAMYSNMHHTALSMSDSYGAVTPIPS-FNHSAVGPLAPPS---PIPQQGDLTPS 730
                          :|:...|.:|.|.|...:.|:.: .:...:..|:.||   |.||.    ..
Zfish   362 --------------FSSYTDTFMSQSASSNHMNPVSNGLSPQVMSILSNPSAVAPQPQH----EF 408

  Fly   731 SLYPCHMTLRPPPMAPAHHHIVPGDGGRPAGVGLGSGQSAN-LGASCSGSGYEVLSAYALPPPPM 794
            |:.|.|.:|                            :::| :.||||.....:.:|.:||.   
Zfish   409 SISPLHSSL----------------------------EASNPISASCSQRSEPIKTADSLPS--- 442

  Fly   795 ASSSAADSSFSAASSASANVTPHHTIAQESCPSPCSSASHFGVAHSSGFSSDPISPA--VSSYAH 857
                                      :|..||...|:.|         :|.||::..  .|.|..
Zfish   443 --------------------------SQSYCPPTYSTTS---------YSVDPVTAGYQYSQYGQ 472

  Fly   858 MSYNYASSANTMTPSSASGTSAHVA 882
            .:.:|.:...:::.........|.|
Zfish   473 TAVDYLAKNVSLSTQRRMKLGEHSA 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 82/129 (64%)
Homeobox 475..527 CDD:278475 33/51 (65%)
pax7bNP_001139621.1 PAX 34..170 CDD:238076 84/131 (64%)
Homeobox 226..279 CDD:278475 33/52 (63%)
Pax7 346..389 CDD:289156 10/80 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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