DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and barhl1a

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001017712.2 Gene:barhl1a / 550407 ZFINID:ZDB-GENE-050417-212 Length:299 Species:Danio rerio


Alignment Length:350 Identity:81/350 - (23%)
Similarity:130/350 - (37%) Gaps:94/350 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 ISAKVSVSIGGNVSNVASG---SRGTLSSSTDLMQTATPLNSSESGGAS--NSGEGSEQEAIYEK 304
            :|...|..|...:|:.||.   |:|...|..:|    :|.:..:||.:|  :....|.::|:..:
Zfish     3 VSNGSSFGIESILSHRASSPCMSKGECRSPAEL----SPRSDLDSGCSSPPSPRRSSVEDAVQRR 63

  Fly   305 LRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQQSWPPRHYSGSW 369
            .|.|                                      |....||..||    ||..:.|:
Zfish    64 ARAL--------------------------------------GLDSPLQISQQ----PRTVTSSF 86

  Fly   370 YPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVATEDIHLKKELDG 434
            .   :.:|.....| :|:...|:|....|      .|.|......|..:.  :..:..:|.|.| 
Zfish    87 L---IRDILADCKP-LAACAPYSSTGQSA------QDAEDCMDKLHSNSS--SDSEYRVKDEAD- 138

  Fly   435 HQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVF 499
              .:.:.|.:..||               ||   :|.::.||:||:.|:..||:.|||..|..|.
Zfish   139 --REISSSRDSPNS---------------RL---KKPRKARTAFTDHQLAQLERSFERQKYLSVQ 183

  Fly   500 ARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTSATASLTDSPNSL 564
            .|..||..:.|.:.:::.|:.|||.||:|:        |.......|.:.:.||...:..||...
Zfish   184 DRMELAASLNLTDTQVKTWYQNRRTKWKRQ--------TAVGLELLAEAGNYSALQRMFPSPYFY 240

  Fly   565 SACSSLLSGSAGGPSVSTINGLSSP 589
            .  .||:|....||.:....|.|:|
Zfish   241 P--QSLVSNLDPGPGLYLYRGPSAP 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 21/51 (41%)
barhl1aNP_001017712.2 TPP_enzymes <122..177 CDD:294952 19/77 (25%)
Homeobox 159..211 CDD:278475 21/51 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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