DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and pitx2

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001017227.1 Gene:pitx2 / 549981 XenbaseID:XB-GENE-482492 Length:345 Species:Xenopus tropicalis


Alignment Length:359 Identity:104/359 - (28%)
Similarity:149/359 - (41%) Gaps:112/359 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 EPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPN 384
            ||.....|||   :.|.|.|||.|..|..||..|.|.||....:|                ..|.
 Frog     6 EPLHLDHLVG---SKLATASSHHQHHHQQHQQHQHHHQQHHHQQH----------------QQPQ 51

  Fly   385 IASVTAYASGPSLAHSLSPPNDIESLASIGHQRN--CPVATEDIHLKKELDGHQSDETGSGEG-- 445
            ..:||                 :.|:||...||:  |         |..|:.|...:|.|.|.  
 Frog    52 PQAVT-----------------LVSMASSLGQRSGEC---------KARLEVHTISDTSSPEAAD 90

  Fly   446 ENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGL 510
            ::.:..:.|..::.||.::   |::.:|.||.||:.|:..||..|:|..|||:..||.:|....|
 Frog    91 KDKSHQSKNEDSSTDDPSK---KKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 152

  Fly   511 PEARIQVWFSNRRAKWRREEKLRNQRRT-------PNSTG----------------------ASA 546
            .|||::|||.|||||||:.|  |||:..       |...|                      .||
 Frog   153 TEARVRVWFKNRRAKWRKRE--RNQQAELCKNGFGPQFNGLMQPYDDMYPSYSYNNWAAKGLTSA 215

  Fly   547 TSSSTS------------ATASLTDSPNSLSACS-------SLLSG--SAGGPSVSTINGLSSPS 590
            :.|:.|            ::.|:..||||:|:.|       |.::|  .:|..|::.:|.||:| 
 Frog   216 SLSTKSFPFFNSMNVNPLSSQSMFSSPNSISSMSMSSGMVPSAVTGVPGSGLNSLNNLNNLSNP- 279

  Fly   591 TLSTNVNAPTLGAGIDSSESPTPIPHI-RPSCTS 623
              |.|...||...   ....||| |:: |.:|.|
 Frog   280 --SLNTAVPTSAC---PYAPPTP-PYVYRDTCNS 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 27/51 (53%)
pitx2NP_001017227.1 XRCC4 <84..144 CDD:284132 19/62 (31%)
Homeobox 117..169 CDD:278475 27/51 (53%)
OAR 303..320 CDD:281777 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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