DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and Pax7

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:XP_006239325.1 Gene:Pax7 / 500574 RGDID:1564360 Length:505 Species:Rattus norvegicus


Alignment Length:783 Identity:208/783 - (26%)
Similarity:269/783 - (34%) Gaps:347/783 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIG 165
            ||||||||:.|||||:..|.||||:||.|.|||.|||.|:||:|||||||.||.|||||||.|||
  Rat    38 VNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIG 102

  Fly   166 GSKPR-VATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPS--VSSINRVLRNLAAQK 227
            ||||| |||.:|..||.:||||.|.:|:||||||||::..|....:||  ||||:||||....:|
  Rat   103 GSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKK 167

  Fly   228 EQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNS 292
            |...                                                             
  Rat   168 EDDE------------------------------------------------------------- 171

  Fly   293 GEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQ 357
             ||.::|...||                                                     
  Rat   172 -EGDKKEEDGEK----------------------------------------------------- 182

  Fly   358 QSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVA 422
                                                                             
  Rat   183 ----------------------------------------------------------------- 182

  Fly   423 TEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLE 487
                ..|..:||...|:          |...:.|:..:.:..|.||||.:|:||:||.:|::.||
  Rat   183 ----KAKHSIDGILGDK----------GNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELE 233

  Fly   488 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTS 552
            |.||||||||::.||.||.:..|.|||:|||||||||:||::            .||        
  Rat   234 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ------------AGA-------- 278

  Fly   553 ATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIP-H 616
                     |.|:|.:.||.|  |.|          |:.:      |||        .|..:| .
  Rat   279 ---------NQLAAFNHLLPG--GFP----------PTGM------PTL--------PPYQLPDS 308

  Fly   617 IRPSCTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHIQSNGHAQGHALVPAISPRLNFNSGSFG 681
            ..|:.|...|.|      ..|..|.||                           |....:.|...
  Rat   309 AYPTTTVSQDGG------STVHRPQPL---------------------------PPSTMHQGGLA 340

  Fly   682 AMYSNMHHTALSMSDSYGAVTPIPSFNHSAVGPLAPPSPI-PQQGDLTPSSLYPCHMTLRPPPMA 745
            |..:     |...|.:|||.....|::.|.:.|.||.:.: |....|:|..:.........||..
  Rat   341 AAAA-----AADSSSAYGARHSFSSYSDSFMNPGAPSNHMNPVSNGLSPQVMSILSNPSAVPPQP 400

  Fly   746 PAHHHIVPGDGGRPAGVGLGSGQSANLGASCSGSGYEVLSAYALPPPPMASSSAADSSFSAASSA 810
            .|...|.|..|      ||.|..|  :.||||.....:....:||                    
  Rat   401 QADFSISPLHG------GLDSASS--ISASCSQRADSIKPGDSLP-------------------- 437

  Fly   811 SANVTPHHTIAQESCPSPCSSASHFGVAHSSGFSSDPISPAVSSYAHMSYNYASSANTMTPSSAS 875
                     .:|..||...|         ::|:|.||::         .|.|:....|.....|.
  Rat   438 ---------TSQSYCPPTYS---------TTGYSVDPVA---------GYQYSQYGQTAVDYLAK 475

  Fly   876 GTS 878
            ..|
  Rat   476 NVS 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 83/122 (68%)
Homeobox 475..527 CDD:278475 33/51 (65%)
Pax7XP_006239325.1 PAX 34..161 CDD:128645 83/122 (68%)
Homeobox 220..274 CDD:395001 34/53 (64%)
Pax7 <354..385 CDD:403540 8/30 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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