DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and Lbx2

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001102714.1 Gene:Lbx2 / 500224 RGDID:1561172 Length:196 Species:Rattus norvegicus


Alignment Length:210 Identity:54/210 - (25%)
Similarity:83/210 - (39%) Gaps:46/210 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 PTSLSEI----PISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVATEDIHLKKE 431
            |.|:::|    .:..||:...:.  .:||..|..|....::.|....||....|..:|       
  Rat    10 PFSIADILGRSMVPGAPSEPRLP--EAGPDPASPLCALEELASKTFQGHSPRAPQPSE------- 65

  Fly   432 LDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYP 496
              |....|...|.|..                    .|:.:::||:||..|:..||:.|....|.
  Rat    66 --GRAVPEAPPGPGTG--------------------VRRRRKSRTAFTPQQVLELERRFVFQKYL 108

  Fly   497 DVFARERLAGKIGLPEARIQVWFSNRRAKWRRE-EKLRNQRRT----------PNSTGASATSSS 550
            ....|:.||.::||..|::..||.|||||.:|: |::|....:          |.:...||:|..
  Rat   109 APSERDGLAARLGLANAQVVTWFQNRRAKLKRDVEEMRADLASLCGLSPGVLCPPALPDSASSPD 173

  Fly   551 TSATASLTDSPNSLS 565
            ...|.|..||...||
  Rat   174 LQPTPSGPDSEPGLS 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 22/51 (43%)
Lbx2NP_001102714.1 Homeobox 86..139 CDD:278475 22/52 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.