DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and Awh

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001261379.1 Gene:Awh / 38451 FlyBaseID:FBgn0013751 Length:287 Species:Drosophila melanogaster


Alignment Length:172 Identity:47/172 - (27%)
Similarity:76/172 - (44%) Gaps:31/172 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 HLKKELDG--HQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKE 489
            |..:.::|  ..|||...|:|.:                    |.|.:|.||:||.:|:..|:..
  Fly   122 HYLETVEGGTTSSDEGCDGDGYH--------------------KSKTKRVRTTFTEEQLQVLQAN 166

  Fly   490 FERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRRE-EKLRNQRRTPNSTGASATSSSTSA 553
            |:....||....||:|...||.:...||||.|.||:.::. ...:|:.|.|     ..:|.:...
  Fly   167 FQIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQKKHIHAGKNKIREP-----EGSSFARHI 226

  Fly   554 TASLTDSPNSLSACSSLLSGSAGG--PS-VSTINGLSSPSTL 592
            ...||.|..:.:.....|:||..|  |: .|:::.||..|::
  Fly   227 NLQLTYSFQNNAQNPMHLNGSKAGLYPTHESSMDELSQDSSV 268

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 21/51 (41%)
AwhNP_001261379.1 LIM1_AWH 8..61 CDD:188759