DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and gsb-n

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster


Alignment Length:809 Identity:183/809 - (22%)
Similarity:256/809 - (31%) Gaps:426/809 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIG 165
            ||||||||:.|||||:..|.||||:|.||.|||.|||.|:||:|||||||.||.|||||||..||
  Fly    24 VNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIG 88

  Fly   166 GSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQ 230
            ||||:|.:.|:.::|.:.::|.||||:||||::|::|...   :.||.|||:|:||         
  Fly    89 GSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFA---DPPSTSSISRLLR--------- 141

  Fly   231 STGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNSGEG 295
                                                                        .|..|
  Fly   142 ------------------------------------------------------------GSDRG 146

  Fly   296 SEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQQSW 360
            ||.                                                              
  Fly   147 SED-------------------------------------------------------------- 149

  Fly   361 PPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVATED 425
                                                                         ..:|
  Fly   150 -------------------------------------------------------------GRKD 153

  Fly   426 IHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEF 490
            ..:...|.|..||                |.:||.:.. :.||||.:|:||:||.:|:::||:.|
  Fly   154 YTINGILGGRDSD----------------ISDTESEPG-IPLKRKQRRSRTTFTAEQLEALERAF 201

  Fly   491 ERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTSATA 555
            .||.||||:.||.||....|.|||||||||||||:.|:.                          
  Fly   202 SRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKH-------------------------- 240

  Fly   556 SLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIPHIRPS 620
                               :||.:    :|||..::.|:||     |.|:..|.:..|:.:    
  Fly   241 -------------------SGGSN----SGLSPMNSGSSNV-----GVGVGLSGATAPLGY---- 273

  Fly   621 CTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHIQSNGHAQGHALVPAISPRLNFNSGSFGAMYS 685
                                .|||||.            ..|::..|.       .:.:...|..
  Fly   274 --------------------GPLGVGS------------MAGYSPAPG-------TTATGAGMND 299

  Fly   686 NMHHTALSMSDSYGAVTPIPSFNHSAVGPLAPPSPIPQQGDLTPSSLYPCHMTLRPPPMAPAHHH 750
            .:||.|.:           ||.:|||.                             ...|.||||
  Fly   300 GVHHAAHA-----------PSSHHSAA-----------------------------TAAAAAHHH 324

  Fly   751 IVPGDGGRPAGVGLGSGQSANLGASCSGSGYEVLSAYALPPPPMASSSAADSSFSAASSASANVT 815
            ...|                         ||:::            .|||...|           
  Fly   325 TQMG-------------------------GYDLV------------QSAAQHGF----------- 341

  Fly   816 PHHTIAQESCPSPCSSASHFG-------------VAHSSGFSSDPISPAVSSYAHMSYNYA---- 863
                      |...:...|||             :...|..::|.:| .:|...|:|.||:    
  Fly   342 ----------PGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTADSVS-KISPSLHLSDNYSKLEA 395

  Fly   864 -SSANTMTPSSASGTSAHVAPGKQQFFAS 891
             |:.:.....:|:..:||||..:...:|:
  Fly   396 PSNWSQAAYHAAANYNAHVAQHQLNDYAA 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 72/119 (61%)
Homeodomain 473..528 CDD:459649 33/54 (61%)
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 72/119 (61%)
Homeodomain 183..239 CDD:459649 33/55 (60%)

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