DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and Gsc

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster


Alignment Length:611 Identity:135/611 - (22%)
Similarity:212/611 - (34%) Gaps:164/611 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LPCLGTAGGSGLGGIAGKPSPTMEAVEASTASHPHSTSSYFATTYYHLTDDECHSGVNQLGGVFV 109
            |..|.|.||.|.|.....||.|.:.        |.|.:.:..|.               :.....
  Fly     2 LSSLWTPGGGGGGTTTTTPSTTPDI--------PPSKAKFKITV---------------VSTPSP 43

  Fly   110 GGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATA 174
            ...|.|......:.::..:.:.|...:.....|:      ||...:.    ||.|..|....|..
  Fly    44 SPPPTPPPAGSMLAQMVETNSPPAGYTLKRSPSD------LGEQQQP----PRQISRSPGNTAAY 98

  Fly   175 EVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQSTGSGSSST 239
            .:.:.:....::|..:      .:.||.                ||:...||.:|..:.:.||..
  Fly    99 HLTTAMLLNSQQCGYL------GQRLQS----------------VLQQQHAQHQQSQSQTPSSDD 141

  Fly   240 SAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNSGEGS------EQ 298
            .:.:.::.......||    .|:.|..|:.|.         |.|.:.||.:...:||      .|
  Fly   142 GSQSGVTILEEERRGG----AAAASLFTIDSI---------LGSRQQGGGTAPSQGSHISSNGNQ 193

  Fly   299 EAIYEKLRLLNTQHAAGPGPLEP-------ARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQ 356
            ..:......|..:.:....|..|       |.|:|:   .|..:.....||.| |..|.|.....
  Fly   194 NGLTSNGISLGLKRSGAESPASPNSNSSSSAAASPI---RPQRVPAMLQHPGL-HLGHLAAAAAS 254

  Fly   357 QQSWPPRHY---SGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRN 418
            ..:..|..:   ..::||..:....::... .|.:.|:.||.:           ..|:..||..:
  Fly   255 GFAASPSDFLVAYPNFYPNYMHAAAVAHVA-AAQMQAHVSGAA-----------AGLSGHGHHPH 307

  Fly   419 CPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQI 483
            .|            .|| ......|...:.....|::|:....      ||| :|:||.||.:|:
  Fly   308 HP------------HGH-PHHPHLGAHHHGQHHLSHLGHGPPP------KRK-RRHRTIFTEEQL 352

  Fly   484 DSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRR-----EEKLRNQRRTPNSTG 543
            :.||..|::||||||..||:||.|:.|.|.|::|||.|||||||:     :|:||..:.....:.
  Fly   353 EQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREEQERLRKLQEEQCGST 417

  Fly   544 ASATSSSTSATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSS 608
            .:.|::|:|.|.|                        ||.||       |..|..|      .|.
  Fly   418 TNGTTNSSSGTTS------------------------STGNG-------SLTVKCP------GSD 445

  Fly   609 ESPTPIPHIR--PSCTSDNDNGRQSE 632
            .....:.||:  |:..||.|.....|
  Fly   446 HYSAQLVHIKSDPNGYSDADESSDLE 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 15/122 (12%)
Homeobox 475..527 CDD:278475 30/51 (59%)
GscNP_001137762.2 Homeobox 343..396 CDD:278475 30/52 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450852
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
54.870

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