DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and pax7a

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_571400.1 Gene:pax7a / 30587 ZFINID:ZDB-GENE-990415-201 Length:507 Species:Danio rerio


Alignment Length:786 Identity:207/786 - (26%)
Similarity:275/786 - (34%) Gaps:373/786 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIG 165
            ||||||||:.|||||:..|.||||:||.|.|||.|||.|:||:|||||||.||.|||||||.|||
Zfish    38 VNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIG 102

  Fly   166 GSKPR-VATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP-----SVSSINRVLRNLA 224
            ||||| |||.:|..:|.:||||.|.:|:|||||:||::.||....:|     |||||:||||...
Zfish   103 GSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRGTVPSGEASSVSSISRVLRARF 167

  Fly   225 AQKEQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGA 289
            .:|:                                                     :..|....
Zfish   168 GKKD-----------------------------------------------------DDDECDKK 179

  Fly   290 SNSGEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQ 354
            ...||             ..|:|:                                         
Zfish   180 DEDGE-------------KKTKHS----------------------------------------- 190

  Fly   355 HQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNC 419
                                                                             
Zfish   191 ----------------------------------------------------------------- 190

  Fly   420 PVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQID 484
                        :||...|:          |..::.|:..:.:..|.||||.:|:||:||.:|::
Zfish   191 ------------IDGILGDK----------GNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLE 233

  Fly   485 SLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSS 549
            .|||.||||||||::.||.||.:..|.|||:|||||||||:||::            .||     
Zfish   234 ELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ------------AGA----- 281

  Fly   550 STSATASLTDSPNSLSACSSLLSGS---AGGPSVSTINGLSS--PSTLSTNVNAPTLGAGIDSSE 609
                        |.|:|.:.||.|.   .|.|::.|.....|  |||..:...:.||       .
Zfish   282 ------------NQLAAFNHLLPGGFPPTGMPTLPTYQLPESTYPSTTLSQDGSSTL-------H 327

  Fly   610 SPTPIPHIRPSCTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHIQSNGHAQGHALVPAISPRLN 674
            .|.|:|                        |..:..||                         |:
Zfish   328 RPQPLP------------------------PSSMHQGG-------------------------LS 343

  Fly   675 FNSGSFGAMYSNMHHTALSMSDSYGAVTPIPSFNH-----SAVGP-----LAPPSPIPQQGDLTP 729
            .:|||...:.|| .||..|.|:::  ::|..|.||     :.:.|     |:.||.:|.|     
Zfish   344 ADSGSAYGLSSN-RHTFSSYSETF--MSPTASSNHMNPVSNGLSPQVMSILSNPSAVPSQ----- 400

  Fly   730 SSLYPCHMTLRPPPMAPAH-HHIVPGDGGRPAGVGLGSGQSANLGASCSGSGYEVLSAYALPPPP 793
                            |.| ..|.|..||..|        |..:.|||                 
Zfish   401 ----------------PQHDFSISPLHGGLEA--------SNPISASC----------------- 424

  Fly   794 MASSSAADSSFSAASSASANVTPHHTIAQESCPSPCSSASHFGVAHSSGFSSDPISPA--VSSYA 856
               |..:|...|..|.||         .|..||...|:.|         :|.||::..  .|.|.
Zfish   425 ---SQRSDPIKSVDSLAS---------TQSYCPPTYSATS---------YSVDPVTAGYQYSQYG 468

  Fly   857 HMSYNY 862
            ..:.:|
Zfish   469 QTAVDY 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 82/125 (66%)
Homeobox 475..527 CDD:278475 33/51 (65%)
pax7aNP_571400.1 PAX 34..166 CDD:238076 84/127 (66%)
Homeobox 223..276 CDD:278475 33/52 (63%)
Pax7 343..386 CDD:289156 13/45 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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