DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and pax9

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_571373.1 Gene:pax9 / 30558 ZFINID:ZDB-GENE-980526-399 Length:343 Species:Danio rerio


Alignment Length:366 Identity:135/366 - (36%)
Similarity:176/366 - (48%) Gaps:87/366 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIG 165
            |||||||||.|||||::.|.:|||||..|.|||||||.|:||:|||||||.||.|||||.|.|||
Zfish     8 VNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIG 72

  Fly   166 GSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQ 230
            ||||||.|..||..|..||:..|.|||||||||||.:.||...|:||||||:|:|||......||
Zfish    73 GSKPRVTTPNVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLPSVSSISRILRNKIGNLSQQ 137

  Fly   231 STGSGSSSTS----------------------AGNSISAKVSV-SIGGNVS--NVASGSRGTLSS 270
            :....|...|                      ||..:.....: ::.|:::  .:...|.    |
Zfish   138 NQYESSKQASHPQPQPTIPYNHLYSYPTPIAAAGTKVPTPPGMPTLPGHMAMHRIWPSSH----S 198

  Fly   271 STDLM--QTATPLNSSESGGASNSGEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLV----- 328
            .||::  ::.|....|::        .|...|..|:.|.:|..:      ..||. :|||     
Zfish   199 VTDILGIRSITEQQISDN--------PSFPSAKLEEWRAINRSN------FSPAN-SPLVNGVDK 248

  Fly   329 ---------GQSPNHLGTRSSH---PQLVHGNHQALQQHQQQSWPPRHYSG---------SWYPT 372
                     .|:||.|.|.:|:   |. :|..|...|..     |...|||         :|.|.
Zfish   249 PHLEPEAKYNQTPNGLPTVNSYVTAPS-IHHYHPPTQVS-----PYMGYSGTTSAYVTGPTWQPP 307

  Fly   373 SLSEIPISSAPNIASVTAYASGPSLAHSLSPPND-IESLAS 412
            |.|.:    :|:...:    |.|....|:|...| :.||.:
Zfish   308 SGSAL----SPHSCDI----SSPLAFKSMSATRDSVHSLVA 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 83/119 (70%)
Homeodomain 473..528 CDD:459649
pax9NP_571373.1 PAX 6..131 CDD:238076 86/122 (70%)
Blue background indicates that the domain is not in the aligned region.

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