DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and rx3

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_571302.1 Gene:rx3 / 30474 ZFINID:ZDB-GENE-990415-238 Length:292 Species:Danio rerio


Alignment Length:258 Identity:86/258 - (33%)
Similarity:120/258 - (46%) Gaps:51/258 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 TEDIHLKKELDGH-----QSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQ 482
            ||.:..||:.:.|     :|....|.:..:::|     |...||:..   |:|.:||||:||..|
Zfish    61 TEHLSPKKDSNKHFDGVCRSTVMVSPDLPDADG-----GKLSDDENP---KKKHRRNRTTFTTFQ 117

  Fly   483 IDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASAT 547
            :..||:.||::|||||::||.||.|:.|||.|:||||.||||||||:|||.             .
Zfish   118 LHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRRQEKLE-------------V 169

  Fly   548 SSSTSATASLTDSPNS--LSACSSL-LSGSAGGPSVSTINGLSS-PSTLSTNVNAP---TLGAGI 605
            ||.....:|:...|.|  ||..|.| |.....||..::.:.|.| ||.::.....|   |....:
Zfish   170 SSIKLQESSMLSIPRSGPLSLGSGLPLEPWLTGPISTSSSPLQSLPSFITPQQAVPASYTPPQFL 234

  Fly   606 DSSESPTPIPHIRPSCTSDNDNGRQSEDCRRVCSPCPLGVGGHQNT----------HHIQSNG 658
            .||.....:|||...|.....:|...:...:...|        :||          .||||.|
Zfish   235 SSSTLNHSLPHIGAVCPPYQCSGFMDKFSLQEADP--------RNTSIASLRMKAKEHIQSIG 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeodomain 473..528 CDD:459649 35/54 (65%)
rx3NP_571302.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
Octapeptide motif 32..39
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..72 4/10 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..107 7/29 (24%)
Homeodomain 107..163 CDD:459649 35/55 (64%)
OAR 268..284 CDD:461067 3/23 (13%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 272..285 1/12 (8%)
Nuclear localization signal. /evidence=ECO:0000255 278..282 0/3 (0%)
Blue background indicates that the domain is not in the aligned region.

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