DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and pax2a

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:XP_021336168.1 Gene:pax2a / 30425 ZFINID:ZDB-GENE-990415-8 Length:519 Species:Danio rerio


Alignment Length:692 Identity:201/692 - (29%)
Similarity:282/692 - (40%) Gaps:229/692 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILG-------RYYE 155
            |.||||||||||.||||||..||:||||||.|.|||||||.|:||:||||||||       ||||
Zfish    20 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGSYQKDLIRYYE 84

  Fly   156 TGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 220
            ||||:|..||||||:|||.:||.||::|||:.|::||||||||||.|.||.||.:||||||||::
Zfish    85 TGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRII 149

  Fly   221 RNLAAQK-EQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSS 284
            |....|. ...|.|:|:..::||::|         |::.:.....  |.|.:..:..||:|..||
Zfish   150 RTKVQQPFHPSSDGTGTPLSTAGHTI---------GDLESTPYTL--TYSCALSVPSTASPPVSS 203

  Fly   285 ESGGASNSGEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNH 349
                |||...||     |....:|....:.|.                    .|.....|..|||
Zfish   204 ----ASNDPVGS-----YSINGILGIPRSNGE--------------------KRKRDDVLWSGNH 239

  Fly   350 QALQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIG 414
                                                                             
Zfish   240 ----------------------------------------------------------------- 239

  Fly   415 HQRNCPVATEDIHLKKELDGHQSDETGS-GEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSF 478
                             |||.:....|| |.|.||:    :.|:.|.      |::.|:.:  :|
Zfish   240 -----------------LDGRKIGYYGSDGSGPNSD----SQGSVES------LRKHLRAD--AF 275

  Fly   479 TNDQIDSLEKEFERTHYPDVF-----ARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRT 538
            |..|:::|::.|||..|||||     .:...|.:..||..               ...|...:.:
Zfish   276 TQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYSLPAL---------------NPGLDEVKPS 325

  Fly   539 PNSTGASATSSSTSATASLTDSPNSLSAC-------SSLLSGSAGGPSVSTINGLS-----SPST 591
            .:::.:|...||.|.:..:....:|.|.|       :||...:   ||...::||:     .|| 
Zfish   326 LSTSVSSDLGSSVSQSYPVVTESHSSSMCVKQEPHEASLAPFT---PSSLAVSGLAELLPLQPS- 386

  Fly   592 LSTNVNAPTLGAGIDSSESPTPIPHIRPS-CTSDNDN---GRQSEDCRRVCSP---CPLGVGGHQ 649
            :|.:.:.|..||          ..|..|| |...:.:   ||:.........|   .|.|.|.:.
Zfish   387 VSVDASTPCYGA----------YAHHAPSYCQYTSQHIIAGREMASTTLPGYPPHVPPTGQGSYP 441

  Fly   650 NTHHIQSNGHAQGHALVPAISPRLNFNSGSFGAMYSNMHHTALSMSDSYGAVTPIPSFNHSAVGP 714
            .             :.:..:.|..:|:    |..||:..:|  :.::::....|.....|.. .|
Zfish   442 T-------------STLAGMVPGSDFS----GNPYSHPQYT--TYNEAWRFSNPALLMPHPG-AP 486

  Fly   715 LAPPSPIPQQGDLTPSSLYPCHMTLRPPPMAPAHH---HIVP 753
            ..|..|:|    :|.:|.:      |.|.....|.   ||||
Zfish   487 GLPLLPLP----MTATSYH------RSPVKLQDHGRGLHIVP 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 93/129 (72%)
Homeobox 475..527 CDD:278475 15/56 (27%)
pax2aXP_021336168.1 PAX 19..150 CDD:128645 93/129 (72%)
Pax2_C 391..500 CDD:315141 26/142 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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