DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and Hoxb9

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001093967.1 Gene:Hoxb9 / 287647 RGDID:1306158 Length:250 Species:Rattus norvegicus


Alignment Length:260 Identity:58/260 - (22%)
Similarity:90/260 - (34%) Gaps:83/260 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 GTRSSHPQLVHGNHQALQQHQQQSWPPRHYSGSWY-----PTSLSEIPISS------AP----NI 385
            ||.||:      ...::..|:.:..||..:....|     |.....:...|      ||    :.
  Rat     5 GTLSSY------YVDSIISHESEDAPPAKFPSGQYANPRQPGHAEHLDFPSCSFQPKAPVFGASW 63

  Fly   386 ASVTAYASG--PSLAHSLSPPNDIESLASIGHQRNCPVATEDIHLKKELDGHQSDETGSGEG--- 445
            |.::.:|||  ||:.|....|            :..| |.|..:|:..|:.....|...|:|   
  Rat    64 APLSPHASGSLPSVYHPYLQP------------QGAP-AAESRYLRTWLEPAPRAEAAPGQGQAA 115

  Fly   446 -----------------------ENSNGGASNIGN-------------TED----DQ----ARLI 466
                                   |.|.|..:.:.|             :||    ||    |..:
  Rat   116 VKAEPLLGAPGELLKQGTPEYSLETSAGREAVLSNQRAGYGDNKICEGSEDKERPDQTNPSANWL 180

  Fly   467 LKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEK 531
            ..|..::.|..:|..|...|||||....|.....|..:|..:.|.|.::::||.|||.|.::..|
  Rat   181 HARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNK 245

  Fly   532  531
              Rat   246  245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 19/51 (37%)
Hoxb9NP_001093967.1 Hox9_act 1..172 CDD:398350 34/185 (18%)
Homeobox 188..242 CDD:395001 19/53 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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