DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and Pax9

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_035171.1 Gene:Pax9 / 18511 MGIID:97493 Length:342 Species:Mus musculus


Alignment Length:374 Identity:146/374 - (39%)
Similarity:176/374 - (47%) Gaps:93/374 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIG 165
            |||||||||.|||||::.|.:|||||..|.|||||||.|:||:|||||||.||.|||||.|.|||
Mouse     8 VNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIG 72

  Fly   166 GSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLR----NLAAQ 226
            ||||||.|..||..|..||:..|.|||||||||||.:.||...|:||||||:|:||    |||.|
Mouse    73 GSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNKIGNLAQQ 137

  Fly   227 ------KEQQSTGSGS-------SSTSAGNSISAKVSV-----SIGGNV--------SNVASGSR 265
                  |:.|.....:       |..|...:.:|||..     :|.|:|        |:..:...
Mouse   138 GHYDSYKQHQPAPQPALPYNHIYSYPSPITAAAAKVPTPPGVPAIPGSVALPRTWPSSHSVTDIL 202

  Fly   266 GTLSSSTDLMQTATPLNSSESGGASNSGEGSEQEAIYEKLRLLNTQHAAGP--------GPLEPA 322
            |..|.:...:..::|.:|.:....|:.|.              |...||.|        |.||..
Mouse   203 GIRSITDQGVSDSSPYHSPKVEEWSSLGR--------------NNFPAAAPHAVNGLEKGALEQE 253

  Fly   323 RAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQQSWPPRHYSGSWYPTSLSEIP---ISSAPN 384
            ..   .||:||.|...||..             ...|..|       |||.....|   .|:|| 
Mouse   254 AK---YGQAPNGLPAVSSFV-------------SASSMAP-------YPTPAQVSPYMTYSAAP- 294

  Fly   385 IASVTAYASGPSLAHS----LSPPN-DI-ESLASIGHQRNCPVATEDIH 427
                :.|.:|....|:    |||.| || .|||..|.|    .|.|..|
Mouse   295 ----SGYVAGHGWQHAGSTPLSPHNCDIPASLAFKGMQ----AAREGSH 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 83/119 (70%)
Homeodomain 473..528 CDD:459649
Pax9NP_035171.1 PAX 6..131 CDD:238076 85/122 (70%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 7..63 40/54 (74%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 82..130 29/47 (62%)
Interaction with KDM5B. /evidence=ECO:0000250 168..189 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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