DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and Pax6

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_038655.1 Gene:Pax6 / 18508 MGIID:97490 Length:436 Species:Mus musculus


Alignment Length:596 Identity:253/596 - (42%)
Similarity:292/596 - (48%) Gaps:207/596 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQ--------------VSNGCVSK 148
            ||||||||||||.||||||||||||||||||||||||||||||              ||||||||
Mouse     5 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVSNGCVSK 69

  Fly   149 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSV 213
            |||||||||||||||||||||||||.||||||:|||||||||||||||||||.|.||||||||||
Mouse    70 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSV 134

  Fly   214 SSINRVLRNLAAQKEQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTA 278
            |||||||||||::|:|.                                                
Mouse   135 SSINRVLRNLASEKQQM------------------------------------------------ 151

  Fly   279 TPLNSSESGGASNSGEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQ 343
                     ||         :.:|:|||:||.|..                              
Mouse   152 ---------GA---------DGMYDKLRMLNGQTG------------------------------ 168

  Fly   344 LVHGNHQALQQHQQQSWPPRHYSGSWYP-TSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDI 407
                           ||..|   ..||| ||:...|..                           
Mouse   169 ---------------SWGTR---PGWYPGTSVPGQPTQ--------------------------- 188

  Fly   408 ESLASIGHQRNCPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQ 472
                                     ||.|..|   |.|||:|..:||..::::.|.||.||||||
Mouse   189 -------------------------DGCQQQE---GGGENTNSISSNGEDSDEAQMRLQLKRKLQ 225

  Fly   473 RNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 537
            |||||||.:||::||||||||||||||||||||.||.||||||||||||||||||||||||||||
Mouse   226 RNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 290

  Fly   538 TPNSTGASATSSSTSATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSS-----PSTLSTNVN 597
            ..::|.:....||:.:|:.....|...:..||..|||..|.:.:.:....|     ||....| |
Mouse   291 QASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTMAN-N 354

  Fly   598 APTLGAGIDSSESPTPIPHIRPSC---TSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHIQSNGH 659
            .|        .:.|.|......||   ||.:.|||..:      :..|..:..|.|:..:.::|.
Mouse   355 LP--------MQPPVPSQTSSYSCMLPTSPSVNGRSYD------TYTPPHMQTHMNSQPMGTSGT 405

  Fly   660 AQGHALVPAIS 670
            .....:.|.:|
Mouse   406 TSTGLISPGVS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 117/136 (86%)
Homeodomain 473..528 CDD:459649 48/54 (89%)
Pax6NP_038655.1 PAX 4..142 CDD:128645 117/136 (86%)
Homeodomain 226..281 CDD:459649 48/54 (89%)

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