back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment ey and ttx-3

DIOPT Version :9

Sequence 1:	NP_001014693.1	Gene:	ey / 43812	FlyBaseID:	FBgn0005558	Length:	898	Species:	Drosophila melanogaster
Sequence 2:	NP_001257168.1	Gene:	ttx-3 / 181357	WormBaseID:	WBGene00006654	Length:	409	Species:	Caenorhabditis elegans

Alignment Length:	248	Identity:	58/248 - (23%)
Similarity:	89/248 - (35%)	Gaps:	69/248 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   364 HYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVATEDIHL 428
            ||:.........|..:::.|.:.:    ...|....:.:||               |.|.|....
Worm   225 HYNAVRSTVLCEEAAVATVPAVVA----PPPPPPTTTTAPP---------------PAAPEQPPR 270

  Fly   429 KKELDGHQS-DETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFER 492
            :...:...| ||.|:|.|                      .::.:|.||||.:.|:.:::..|..
Worm   271 EASTEAEASTDEDGNGSG----------------------SQRSKRMRTSFKHHQLRAMKTYFAL 313

  Fly   493 THYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTSATASL 557
            .|.||....::||.|..|.:..:||||.|.|||:|||         .:..|.|::....||..:.
Worm   314 NHNPDAKDLKQLAAKTNLTKRVLQVWFQNARAKYRRE---------LHDGGRSSSPLCVSAPLAS 369

  Fly   558 TDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSES 610
            .|....||:.|                  |..||....:|.|.|.:.|.|..|
Worm   370 MDMNPPLSSSS------------------SGHSTDGYQLNTPPLSSEIYSPNS 404

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.