DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ey and alr-1

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_509860.1 Gene:alr-1 / 181302 WormBaseID:WBGene00044330 Length:362 Species:Caenorhabditis elegans


Alignment Length:420 Identity:110/420 - (26%)
Similarity:160/420 - (38%) Gaps:104/420 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 PQLVHGNHQALQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYA------------SG 394
            |:|...:....::....:.||.|                 .||.|.:..|:            :.
 Worm     2 PELKKEDSSKDEKDLDMNCPPLH-----------------RPNGADLNQYSKSLMEQLQAQLFAN 49

  Fly   395 PSLAHSLSPPNDIESLASIGHQRNCPVATEDIHLKKELDGHQSD------ETGSGEGENSNGGAS 453
            |:|.....||  ..|:|::         |.:.|..||.||.::.      |..|......||..|
 Worm    50 PALQFPSFPP--AFSIAAL---------TNNQHELKEDDGKKTPTGDNILEAASVLDNRENGSPS 103

  Fly   454 NIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 518
            :..|:.||..    |||.:|.||:|:..|:|.|||.|.||||||||.||.||.::.|.|||:|||
 Worm   104 DGTNSPDDNG----KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQVW 164

  Fly   519 FSNRRAKWRREEKLRNQR------RTPNSTGASATSSSTSATASLTDSPNSLSACSSLLSGSAGG 577
            |.|||||:|::|:.....      ..|||.|               |:|..:     :||..|  
 Worm   165 FQNRRAKYRKQERSSTHHPYQAPMSIPNSNG---------------DNPYQM-----MLSQEA-- 207

  Fly   578 PSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPT-PIPHIRPSCTSDNDNGRQSEDCRRVCSPC 641
             ..:.||..::...|:..|...|...   .|:||: |:....|...:......|:.|...:.   
 Worm   208 -IFAAINQQAAAHLLNEQVRIATSDR---RSQSPSVPVTTSSPILPTSVTPTFQNADALNML--- 265

  Fly   642 PLGVGG----HQNTHHIQSNGHAQGHALVPAISPRLNFNSGSFGAMYSNMHHTALSMSDS----- 697
               .||    .|...::|....|     :.|...:| ..|...||........||...||     
 Worm   266 ---FGGITPVTQQLLYVQQFSRA-----MDAFRTQL-LGSVPAGATAEVTDVVALKTEDSKSNSR 321

  Fly   698 YGAVTPIPSFNHSAVGPLAPPSPIPQQGDL 727
            .|:.:|.|:.:..|......|:.......|
 Worm   322 AGSSSPTPTESSGAAATSTSPTNFADMNSL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeodomain 473..528 CDD:459649 35/54 (65%)
alr-1NP_509860.1 Homeodomain 118..174 CDD:459649 35/55 (64%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.