DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and Nkx2-6

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_035050.2 Gene:Nkx2-6 / 18092 MGIID:97351 Length:289 Species:Mus musculus


Alignment Length:289 Identity:60/289 - (20%)
Similarity:102/289 - (35%) Gaps:63/289 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 PISSAP-NIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVATEDIHLKKELDGHQSD--- 438
            |::|.| ::|.:....         ....|.::|:.....|| ||....:.:.:|....:|.   
Mouse     5 PVASTPFSVADILRLE---------CQQKDSKTLSQWELHRN-PVKPRYLRMNQESGWFESSDRA 59

  Fly   439 -------------ETGS---GEGENSNG-----GASN------IGNTEDDQAR----LILKRKLQ 472
                         |.||   ||.:...|     ||.|      :||...|..|    ....|..:
Mouse    60 QAVPFRCTWETVLEMGSNPVGEPQTPPGTISRLGARNPMTDRGVGNLSGDMRRGGPVSTRTRPQR 124

  Fly   473 RNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 537
            ::|..|:..|:.:||:.|::..|.....||.||..:.|...::::||.|||.|    .|.:.|.:
Mouse   125 KSRVLFSQAQVLALERRFKQQRYLTAPEREHLASALQLTSTQVKIWFQNRRYK----SKSQRQDQ 185

  Fly   538 TPNSTGASATSSSTSATASLTD-------------SPNSLSACSSLLSGSAGGPSVSTINGLSSP 589
            |....|........:....:.|             .|...::..|...|.||.|..::.....:.
Mouse   186 TLELAGHPLAPRRVAVPVLVLDGKPCLDPDVAAFLGPYKATSPYSCFGGYAGTPYDASYASRCTS 250

  Fly   590 STLSTNVNAPTLGAGID-SSESPTPIPHI 617
            ::.......|...:|.. ..:|..|..|:
Mouse   251 ASAGPGPLTPLASSGFSPGGQSAAPQGHL 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 18/51 (35%)
Nkx2-6NP_035050.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..125 13/49 (27%)
Homeobox 126..179 CDD:278475 18/56 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..289 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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