DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and Gsx1

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_032204.1 Gene:Gsx1 / 14842 MGIID:95842 Length:261 Species:Mus musculus


Alignment Length:229 Identity:57/229 - (24%)
Similarity:83/229 - (36%) Gaps:59/229 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 PSLAHSLSPPNDIESLA-SIGHQRN------CP--VATEDIH----------LKKE--------- 431
            |...:::.||:.:..|: ...|.|.      ||  |....:|          ||..         
Mouse    27 PLFPYAVPPPHALHGLSPGACHARKAGLLCVCPLCVTASQLHGPPGPPALPLLKASFPPFGSQYC 91

  Fly   432 ---LDGHQSDETGSGEGENSNGGASNIGNTE--------------DDQARLILKRKLQRNRTSFT 479
               |....|...|...|..:...|:.:..|.              |..:..:...|  |.||:||
Mouse    92 HAPLGRQHSVSPGVAHGPAAAAAAAALYQTSYPLPDPRQFHCISVDSSSNQLPSSK--RMRTAFT 154

  Fly   480 NDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGA 544
            :.|:..||:||....|.....|..:|..:.|.|.::::||.|||.|.::|.|..|.|   ...||
Mouse   155 STQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGSNHR---GGAGA 216

  Fly   545 SA---------TSSSTSATASLTDSPNSLSACSS 569
            .|         .||.:||..|..|....:|..||
Mouse   217 GAGGGAPQGCKCSSLSSAKCSEDDDELPMSPSSS 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 20/51 (39%)
Gsx1NP_032204.1 SNAG domain. /evidence=ECO:0000250 1..20
Homeobox 150..203 CDD:395001 20/52 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..261 16/53 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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