DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and Arx

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001292869.1 Gene:Arx / 11878 MGIID:1097716 Length:564 Species:Mus musculus


Alignment Length:595 Identity:130/595 - (21%)
Similarity:206/595 - (34%) Gaps:225/595 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 RP-CDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYK------RECP 188
            || |.......:|:.|:..||||   ....:.|.:|.::.  ..|.:.|:..|.|      :...
Mouse    13 RPECKSKSPTLLSSYCIDSILGR---RSPCKMRLLGAAQS--LPAPLASRADQEKAMQGSPKSSS 72

  Fly   189 SIFAWEIR-------------DRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQSTGSGSSSTS 240
            :.|..|:.             .||||                                 |:::.:
Mouse    73 APFEAELHLPPKLRRLYGPGGGRLLQ---------------------------------GAAAAA 104

  Fly   241 AGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNSGEGSEQEAIYEKL 305
            |..:.:|..:.:.|      .:|.||.:.....  ..|.|....:|.||..:...:   |.::.|
Mouse   105 AAAAAAAAAATATG------TAGPRGEVPPPPP--PAARPGERQDSAGAVAAAAAA---AAWDTL 158

  Fly   306 RLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQQSWPPRHYSGSWY 370
            ::                               |..||:.....::.:::.....||        
Mouse   159 KI-------------------------------SQAPQVSISRSKSYRENGAPFVPP-------- 184

  Fly   371 PTSLSEIPISSAP--------NIASVTAYASGPSLAHSLSPPNDIESL----------------- 410
            |.:|.|:   |.|        .:::.:...|.|:........:|.|.|                 
Mouse   185 PPALDEL---SGPGGVAHPEERLSAASGPGSAPAAGGGTGAEDDEEELLEDEEDEEEEEELLEDD 246

  Fly   411 ----------ASIGHQRNCPVATE-------------------DIHLKKELDGHQSDETGSGEGE 446
                      |.:...|.|.|||.                   ::..|:||..|..|..|. :||
Mouse   247 DEELLEDDARALLKEPRRCSVATTGTVAAAAAAAAAAVATEGGELSPKEELLLHPEDAEGK-DGE 310

  Fly   447 NS---NGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKI 508
            :|   :.|:        |....:||||.:|.||:||:.|::.||:.|::|||||||.||.||.::
Mouse   311 DSVCLSAGS--------DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 367

  Fly   509 GLPEARIQVWFSNRRAKWRREEKLRNQRRTP------------------------------NSTG 543
            .|.|||:||||.|||||||:.||...|...|                              :|..
Mouse   368 DLTEARVQVWFQNRRAKWRKREKAGAQTHPPGLPFPGPLSATHPLSPYLDASPFPPHHPALDSAW 432

  Fly   544 ASATSSSTSATASLTDSPNSLS--------ACSSLLSGS----------AGGPSVSTINGLSSPS 590
            .:|.:::.:|..||...|.|.|        ..|:.|..:          |.|...||:..|:|.|
Mouse   433 TAAAAAAAAAFPSLPPPPGSASLPPSGAPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAPLTSAS 497

  Fly   591 TLSTNVNAPT 600
            |.:..:..||
Mouse   498 TAAALLRQPT 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 21/109 (19%)
Homeobox 475..527 CDD:278475 32/51 (63%)
ArxNP_001292869.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..79 4/24 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..264 28/205 (14%)
Homeobox 334..386 CDD:278475 32/51 (63%)
OAR 528..545 CDD:281777
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 532..545
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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