DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and prrx2

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:XP_002940803.1 Gene:prrx2 / 100488907 XenbaseID:XB-GENE-947362 Length:248 Species:Xenopus tropicalis


Alignment Length:228 Identity:80/228 - (35%)
Similarity:111/228 - (48%) Gaps:48/228 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 SLAHSLSPPNDIESLASIGHQRNCPVA--TEDIHLKKELDGHQSDETGSGEGENS-----NGGAS 453
            |::|.|    |:|. |:.|.|....:|  |||          :..|..||...:|     .||:.
 Frog    32 SVSHLL----DLEE-AAAGMQTTADMAAPTED----------EDKEPASGGSSDSEVTIHEGGSP 81

  Fly   454 NIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 518
            |..:.:...     |:|.:||||:|.:.|:.:||:.||||||||.|.||.||.::.|.|||:|||
 Frog    82 NPSSNKSSG-----KKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVSLSEARVQVW 141

  Fly   519 FSNRRAKWRREEKLRNQRRT-------PNSTGASATSSSTSATASLTDSP-NSLSACSSLLSGSA 575
            |.|||||:||.|:.....|:       ...|||....|..::|.:....| ||.|..|     :|
 Frog   142 FQNRRAKFRRNERAMLASRSATHLKSYSQDTGAEQQVSPRASTLTPEYMPWNSNSNYS-----NA 201

  Fly   576 GGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSS 608
            ..|..       ||:|.:|: .|||.|..:..|
 Frog   202 SLPPY-------SPTTTATS-TAPTQGVNMADS 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeodomain 473..528 CDD:459649 34/54 (63%)
prrx2XP_002940803.1 Homeodomain 95..151 CDD:459649 34/55 (62%)
Blue background indicates that the domain is not in the aligned region.

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