DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and pax3b

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001315326.1 Gene:pax3b / 100150137 ZFINID:ZDB-GENE-080917-53 Length:469 Species:Danio rerio


Alignment Length:767 Identity:212/767 - (27%)
Similarity:286/767 - (37%) Gaps:346/767 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIG 165
            ||||||||:.|||||:..|.||||:||.|.|||.|||.|:||:|||||||.||.|||||||.|||
Zfish    38 VNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIG 102

  Fly   166 GSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQ 230
            |:|.:..:.:|..::.:||||.|.||:|||||:||:|.:|..:|:|:||||:|::|.        
Zfish   103 GTKSKTTSPDVEKRVEEYKRENPGIFSWEIRDKLLKEGICDRNNVPTVSSISRIMRG-------- 159

  Fly   231 STGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNSGEG 295
                                          .||:|                       |....|.
Zfish   160 ------------------------------RSGTR-----------------------ADEEEEE 171

  Fly   296 SEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQQSW 360
            .::|.|..:.|..|.                       |.|                        
Zfish   172 EDEEDIERREREENA-----------------------HRG------------------------ 189

  Fly   361 PPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVATED 425
                                                 |||      ||.:.:   .|:.|     
Zfish   190 -------------------------------------AHS------IEGILA---DRSSP----- 203

  Fly   426 IHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEF 490
                       |||                |:..:.:..|.||||.:|:||:||.||::.||:.|
Zfish   204 -----------SDE----------------GSEVESEPDLPLKRKQRRSRTTFTADQLEELERAF 241

  Fly   491 ERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTSATA 555
            |||||||::.||.||.:..|.|||:|||||||||:||::            .||           
Zfish   242 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ------------AGA----------- 283

  Fly   556 SLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIPHIRPS 620
                  |.|.|.:.|:.|.....::|::    ||..|               ||||.| |...| 
Zfish   284 ------NQLMAFNHLIPGGFSHHAMSSL----SPYQL---------------SESPYP-PAALP- 321

  Fly   621 CTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHIQSNGHA--QGHALVPAISPRLNFNSGSFGAM 683
                       :|...|..|.||....|      ||:|.|  :|                  ||.
Zfish   322 -----------QDSGTVHRPQPLPHSSH------QSSGGAGPEG------------------GAS 351

  Fly   684 YS-NMHHTALSMSDSYGAVTPIPSFNHSAVGPLAPPSPIPQQ--GDLTPSSLYPCHMTLRPPPMA 745
            |. :..|.....||::|   |..:.|::|:.     :.:..|  |.:|||.  ..|.|       
Zfish   352 YCLSSRHGYTGYSDAFG---PHNTHNNNAIN-----NGLSSQVMGLITPSG--ASHPT------- 399

  Fly   746 PAHHHIVPGDGGRPAGVGLGSGQSANLGASCSGSGYEVLSAYALPPPPMASSSAADSSFSAASSA 810
                         .|...|.||.|  :.:||| ...|.||  :||                   |
Zfish   400 -------------QAEFSLDSGSS--VSSSCS-QRMESLS--SLP-------------------A 427

  Fly   811 SANVTPHHTIAQESCPSPCSSASHFGVAHSSGFSSDPISPAVSSYAHMSYNY 862
            .:|:         |.|...||||.:.:.||..:.       .|.|...|::|
Zfish   428 LSNL---------SNPQSYSSASFYSLEHSGHYQ-------YSQYGQNSFHY 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 75/119 (63%)
Homeobox 475..527 CDD:278475 33/51 (65%)
pax3bNP_001315326.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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