DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and phox2b

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001116492.1 Gene:phox2b / 100124329 XenbaseID:XB-GENE-1000415 Length:293 Species:Xenopus tropicalis


Alignment Length:350 Identity:94/350 - (26%)
Similarity:128/350 - (36%) Gaps:106/350 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 DIESLASIGHQRNCPVATEDIHLKKELDGHQSDETGSGEGENS-----NGGASNIGNTED----- 460
            |..||||         |..|.....:..|.|.:...:..|..|     ..|:.::|...|     
 Frog    22 DTSSLAS---------AYADFSSCSQASGFQYNPIRTTFGATSGCPSLTPGSCSLGTLRDHQSSP 77

  Fly   461 ----------DQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARI 515
                      |...|..|||.:|.||:||:.|:..||:.|..|||||::.||.||.||.|.|||:
 Frog    78 YAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARV 142

  Fly   516 QVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTSATASLTDSPNSLSACSSLLSGSAGGPSV 580
            ||||.|||||:|::|:...........|:|...|.:|......||       .|....|.|||. 
 Frog   143 QVWFQNRRAKFRKQERAAAAAAAAAKNGSSGKKSDSSRDEESKDS-------KSADPDSTGGPG- 199

  Fly   581 STINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIPHIRPSCTSDNDNGRQSEDCRRVCSPCPLGV 645
                  ::|:.      .|:.|.|              ||.:....||...|       |..:||
 Frog   200 ------NNPNP------TPSCGGG--------------PSPSGAQGNGVPQE-------PGKVGV 231

  Fly   646 ---GGHQNTHHIQSNGHAQGHALVPAISPRLNFNSGSFGAMYSNMHHTALSMSDSYGAVTPIPSF 707
               |...:...:..:|..||.|..|.                              |.:|.||. 
 Frog   232 PGPGSLTSASVVGVSGGPQGWATGPG------------------------------GTITSIPD- 265

  Fly   708 NHSAVGPLAPPSPIPQQGDLTPSSL 732
              |..||.|......|:.:.|.::|
 Frog   266 --SLGGPFASVLSSLQRPNSTKATL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeodomain 473..528 CDD:459649 33/54 (61%)
phox2bNP_001116492.1 Homeodomain 99..155 CDD:459649 33/55 (60%)
Blue background indicates that the domain is not in the aligned region.

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