DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and shox2

DIOPT Version :9

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001093694.1 Gene:shox2 / 100101703 XenbaseID:XB-GENE-480993 Length:311 Species:Xenopus tropicalis


Alignment Length:326 Identity:80/326 - (24%)
Similarity:121/326 - (37%) Gaps:98/326 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 ASGPSLAHSLSPPNDIESLASIGHQRNCPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIG 456
            |..|.|...||    :|.:...|..:...|:.|....|:||.....:|.|.              
 Frog    69 ARSPVLELDLS----VERIRESGSPKLTEVSPEIKERKEELKQQALEEEGQ-------------- 115

  Fly   457 NTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSN 521
                      .|.|.:|:||:||.:|::.||:.|:.|||||.|.||.|:.::||.|||:||||.|
 Frog   116 ----------TKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQN 170

  Fly   522 RRAKWRREEKLRNQRRTPNSTGASATSSSTSATASLTDSPNSLSACSSLLSGSAGGPSVSTINGL 586
            ||||.|::|   ||.......||.                :...||..       .|.|: :..|
 Frog   171 RRAKCRKQE---NQLHKGVLIGAG----------------SQFEACRV-------APYVN-VGAL 208

  Fly   587 SSPSTLSTNVNAPTLGAGIDSS-ESPTPIPHIRPSCTSDNDNGRQSEDCRRVCSPCPLGVGGHQN 650
            ..|....::.|.|:|...:.:. :..:.:.|..                                
 Frog   209 RMPFQQDSHCNVPSLSFQVQAQLQLDSAVAHAH-------------------------------- 241

  Fly   651 THHIQSNGHAQGHALVPAISPRLNFNSGSFGAMYSNM-HHTALSMSDSYGAVTPIPSFNHSAVGP 714
             ||:  :.|...||      |.:.|.:..||...:.: ..||.:.|....|.....|..:|::..
 Frog   242 -HHL--HPHLTAHA------PYMMFPAPPFGLPLATLAAETATAASVVAAAAAAKTSSKNSSIAD 297

  Fly   715 L 715
            |
 Frog   298 L 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 31/51 (61%)
shox2NP_001093694.1 Homeobox 123..177 CDD:365835 31/53 (58%)
OAR 292..307 CDD:367680 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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