DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and prop1

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001170932.3 Gene:prop1 / 100001377 ZFINID:ZDB-GENE-081107-40 Length:227 Species:Danio rerio


Alignment Length:286 Identity:76/286 - (26%)
Similarity:116/286 - (40%) Gaps:92/286 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 LQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQ 416
            :|:.|||           :|.:.||:.:||:.:|                    |::.     |.
Zfish     3 IQKPQQQ-----------FPENYSEVTVSSSADI--------------------DVQI-----HP 31

  Fly   417 RNCPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTND 481
            |.....:|.:.                     :|||         :||.......:|:||:|:|:
Zfish    32 RKVSQKSESVR---------------------DGGA---------RARPYPSPSRRRHRTTFSNE 66

  Fly   482 QIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGA-- 544
            |::.||..|.:.||||::.||.||....|.||||||||.|||||.|:::::     |..|...  
Zfish    67 QLEHLELAFRQNHYPDIYYREELARVTKLNEARIQVWFQNRRAKQRKQDRI-----TQKSLAVSM 126

  Fly   545 --------SATSSSTSATASLTDSPNSL---SACSSLLSGSAGGPSVSTINGLSSPS-TLSTNVN 597
                    |....|:||.......|:||   ...||:|......|..|:.:..|||| :|.:..|
Zfish   127 MPVRGPLFSTMCVSSSAMGRQCQCPHSLPHVPQFSSVLPPGGYPPHPSSGSQFSSPSGSLPSQAN 191

  Fly   598 APTLGAGIDSSESPTPIPHIRPSCTS 623
            .       ..::....:.:|.||.||
Zfish   192 R-------QPNDWYNQLRNIGPSPTS 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeodomain 473..528 CDD:459649 31/54 (57%)
prop1NP_001170932.3 None
Blue background indicates that the domain is not in the aligned region.

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