DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Tgfb2

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_112393.2 Gene:Tgfb2 / 81809 RGDID:70491 Length:442 Species:Rattus norvegicus


Alignment Length:493 Identity:109/493 - (22%)
Similarity:183/493 - (37%) Gaps:141/493 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 SVSLYRNTLINIESMLQRQLREKAKVDSIESIKMHILMRLNLKKLP-NITKPISVPQNIID--NF 240
            ::||...:.::::..::::         ||:|:..||.:|.|...| :..:|..||..:|.  |.
  Rat    18 ALSLSTCSTLDMDQFMRKR---------IEAIRGQILSKLKLTSPPEDYPEPDEVPPEVISIYNS 73

  Fly   241 YRDY---NASSKTTVWNRMESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDL 302
            .||.   .||.:.....| |..||.:      |...:                       :.||:
  Rat    74 TRDLLQEKASRRAAACER-ERSDEEY------YAKEV-----------------------YKIDM 108

  Fly   303 NKNQAKKSDIP-INTNDEEYESILSHISSIY------IFPEEIQPHVRHNRKVDVFRFQI---DS 357
            ..:...::..| :.|:.....|..|..|.:.      |.|...:|:.|      :.||.:   :.
  Rat   109 PSHFPSETVCPVVTTSSGSVGSFCSRQSQVLCGYLDAIPPTFYRPYFR------IVRFDVSTMEK 167

  Fly   358 SYSDLSYATLHLY-LRGWDWISAHQPGLLEEIKKQPRKDIVVTIHRAI--RVANTTSFNPKVKMF 419
            :.|:|..|...:: |:......|.|...|.:|.|.  ||:.....|.|  :|..|.:        
  Rat   168 NASNLVKAEFRVFRLQNPKARVAEQRIELYQILKS--KDLTSPTQRYIDSKVVKTRA-------- 222

  Fly   420 EFRHSIPSGLGQWVAVDLKSLL--------GNLG--------------------SNMTQEIL--- 453
                     .|:|::.|:...:        .|||                    .|.:||:.   
  Rat   223 ---------EGEWLSFDVTDAVHEWLHHKDRNLGFKISLHCPCCTFIPSNNYIIPNKSQELEARF 278

  Fly   454 --IKGAETWMKSLVVTTDNTSK--NPLTVHIEI---------GSQKKHRRKRSVYMD---CTEND 502
              |.|..|:......|..:|.|  :..|.|:.:         ..|...||||:  :|   |..|.
  Rat   279 AGIDGTSTYASGDQKTIKSTRKKSSGKTPHLLLMLLPSYRLESQQSSRRRKRA--LDAAYCFRNV 341

  Fly   503 HDMRCCRYPLKVNF-TSFGWHFVVAPTSFDAYFCSGDCKVGYLEQYPHTHLAAL------TTSAT 560
            .| .||..||.::| ...||.::..|..::|.||:|.|...:.....||.:.:|      ..||:
  Rat   342 QD-NCCLRPLYIDFKRDLGWKWIHEPKGYNANFCAGACPYLWSSDTQHTKVLSLYNTINPEASAS 405

  Fly   561 PCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSCS 598
            |||....:..|::||:..| ...:..:.||.|:.|.||
  Rat   406 PCCVSQDLEPLTILYYIGN-TPKIEQLSNMIVKSCKCS 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 29/97 (30%)
Tgfb2NP_112393.2 TGFb_propeptide 21..256 CDD:459906 57/298 (19%)
TGF_beta_TGFB2 345..441 CDD:381655 29/96 (30%)

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