DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and ndr1

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_571041.1 Gene:ndr1 / 799352 ZFINID:ZDB-GENE-990415-256 Length:392 Species:Danio rerio


Alignment Length:391 Identity:74/391 - (18%)
Similarity:133/391 - (34%) Gaps:122/391 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 DESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTV-NEFLIDLNKNQAKKSDIPINTNDEEYES 323
            ||.|.|       |.....::..|...:.....:.| ::|.:..:.:....||      |.:...
Zfish    70 DEKHFS-------HENPTLYESDSVLSLVAKSCHQVGDKFAVTFDMSSISASD------DVQRAE 121

  Fly   324 ILSHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWDWISAHQPGLLEEI 388
            :...:           ||:|...:||::.                          |..|    |.
Zfish   122 LRIRL-----------PHLRSELEVDIYH--------------------------ASTP----EC 145

  Fly   389 KKQPRKDIVVTIHRAIRVAN--TTSFNPKVKMFEFRHSIPSGLGQW-----------------VA 434
            ::.|.::  |.:|.....||  .::|....::|    :|.:.|..|                 :|
Zfish   146 ERSPCEE--VRVHLGTLNANPINSTFRSSWRIF----NITALLKYWLHQSERVPFEEPTQMPPMA 204

  Fly   435 VDLKSLLGNLGSNMTQEILIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQ---KKHRRKRSVYM 496
            ...||:.....:.:...:..|.......:|:.|.:: ||.........||:   ::|||..    
Zfish   205 EGHKSVHHPTANRVMMVVYSKQNRAKTSTLIRTAEH-SKYVALDRAGGGSEPVPRRHRRNH---- 264

  Fly   497 DCTENDHDMR--------------------CCRYPLKVNFTSFGW-HFVVAPTSFDAYFCSGDCK 540
               ..|..:|                    |.:..:.|:|...|| .::|.|..::||.|.|.|.
Zfish   265 ---RTDDRVRDAAAGMIPGVSHEGGEKKPLCKKVDMWVDFDQIGWSDWIVYPKRYNAYRCEGSCP 326

  Fly   541 VGYLEQYPHTHLAALTT-------SATPC--CSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCS 596
            ....|.:..|:.|.:.:       ...||  |.||:::.||:||: :|..:|:.....|.|..|.
Zfish   327 TPVDETFTPTNHAYMQSLLKLHHPDRVPCLSCVPTRLAPLSMLYY-ENGKMVMRHHEGMVVAECG 390

  Fly   597 C 597
            |
Zfish   391 C 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 30/120 (25%)
ndr1NP_571041.1 TGFb_propeptide 56..190 CDD:480997 29/179 (16%)
TGF_beta_NODAL 290..392 CDD:381637 30/103 (29%)

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