DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and TGFB1

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:XP_011525544.1 Gene:TGFB1 / 7040 HGNCID:11766 Length:391 Species:Homo sapiens


Alignment Length:451 Identity:83/451 - (18%)
Similarity:147/451 - (32%) Gaps:150/451 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 EKAKVDSIESIKMHILMRLNLKKLPN--ITKPISVPQNIIDNFYRDYNASSKTTVWNRMESIDES 262
            |..|...||:|:..||.:|.|...|:  ...|..:|:.::             .::|        
Human    39 ELVKRKRIEAIRGQILSKLRLASPPSQGEVPPGPLPEAVL-------------ALYN-------- 82

  Fly   263 HLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEEYESILSH 327
                               |:..::.|:.|....|...|....:..:. :.:.|::|.|:.....
Human    83 -------------------STRDRVAGESAEPEPEPEADYYAKEVTRV-LMVETHNEIYDKFKQS 127

  Fly   328 ISSIYIF----------PEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWDWISAHQP 382
            ..|||:|          ||.:.                      ||.|.|.| ||          
Human   128 THSIYMFFNTSELREAVPEPVL----------------------LSRAELRL-LR---------- 159

  Fly   383 GLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSLLGNLGSN 447
                         :.:.:.:.:.:....| |...:....|...||...:|::.|:        :.
Human   160 -------------LKLKVEQHVELYQKYS-NNSWRYLSNRLLAPSDSPEWLSFDV--------TG 202

  Fly   448 MTQEILIKGAET--WMKSLVVTTDNTSKNPLTVHIEIG--------------------------- 483
            :.::.|.:|.|.  :..|...:.|:.. |.|.|.|..|                           
Human   203 VVRQWLSRGGEIEGFRLSAHCSCDSRD-NTLQVDINAGFTTGRRGDLATIHGMNRPFLLLMATPL 266

  Fly   484 SQKKH----RRKRSVYMDCTENDHDMRCCRYPLKVNF-TSFGWHFVVAPTSFDAYFCSGDCKVGY 543
            .:.:|    |.:|::..:...:..:..||...|.::| ...||.::..|..:.|.||.|.|...:
Human   267 ERAQHLQSSRHRRALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCLGPCPYIW 331

  Fly   544 LEQYPHTHLAAL------TTSATPCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSCS 598
            .....::.:.||      ..||.|||.|..:..|.::|:......| ..:.||.|..|.||
Human   332 SLDTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRKPKV-EQLSNMIVRSCKCS 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 27/97 (28%)
TGFB1XP_011525544.1 TGFb_propeptide 30..262 CDD:395559 51/319 (16%)
TGF_beta_TGFB1 293..391 CDD:381654 27/98 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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