DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Bmp8a

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001102902.1 Gene:Bmp8a / 680931 RGDID:1585858 Length:399 Species:Rattus norvegicus


Alignment Length:461 Identity:110/461 - (23%)
Similarity:166/461 - (36%) Gaps:152/461 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 QRQLREKAKVDSIESIKMHILMRLNLKKLPN-------ITKPISVPQNIIDNFYRDYNASSKTTV 252
            ||:|..:.:.|    ::..||..|.|...|.       ..:|.|.|..::|             :
  Rat    32 QRRLGARERRD----MQREILAVLGLPGRPRPRAPPAAARQPASAPLFMLD-------------L 79

  Fly   253 WNRMESID-----ESHLSIND-------------TYG---DHIMTDFFDESSSSQMQGDDANTVN 296
            ::.|...|     ::||...|             |.|   .|.....||   .:|:...:|.|..
  Rat    80 YHAMTDDDDGGPPQAHLGRADLVMSFVNMVERDRTLGYQEPHWKEFHFD---LTQIPAGEAVTAA 141

  Fly   297 EFLIDLNKNQAKKSDIPINTNDEEYESILSHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSD 361
            ||.|     ..:.|..|.||.        .|||...:..|      |.||:.|:|       :.|
  Rat   142 EFRI-----YKEPSTHPPNTT--------LHISMFEVVQE------RSNRESDLF-------FLD 180

  Fly   362 LSYATLHLYLRGW---DWISAHQPGLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRH 423
            |.  ||.....||   |..:|....||..     .||:      .:|:...|         |..|
  Rat   181 LQ--TLRSGDEGWLVLDITAASDRWLLNH-----NKDL------GLRLYVET---------EDGH 223

  Fly   424 SIPSGLGQWVAVDLKSLLGNLGSNMTQEILIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQKKH 488
            |:..||.        .|||.......|..:            ||....|.:|:.....:...|:.
  Rat   224 SLDPGLA--------GLLGQTAPRSRQPFM------------VTFFRASSSPVRTPRAVRPLKRR 268

  Fly   489 RRKRSVYM-------DCTENDHDMR----CCRYPLKVNFTSFGW-HFVVAPTSFDAYFCSGDCKV 541
            :.|::..:       ...::.|..|    |.|:.|.|:|...|| .:|:||..:.||:|.|:|  
  Rat   269 QPKKTNELPHPNKLPGIFDDGHGSRGREVCRRHELYVSFRDLGWLDWVIAPQGYSAYYCEGEC-- 331

  Fly   542 GYLEQYP---------HTHLAALTTSATP------CCSPTKMSSLSLLYFDDNHNLVLSVIPNMS 591
                .:|         |..|.:|.....|      ||:|||:|:.|:||:|.::|::|....||.
  Rat   332 ----AFPLDSCMNATNHAILQSLVHLMKPDVVPKACCAPTKLSATSVLYYDSSNNVILRKHRNMV 392

  Fly   592 VEGCSC 597
            |:.|.|
  Rat   393 VKACGC 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 37/110 (34%)
Bmp8aNP_001102902.1 TGFb_propeptide 28..248 CDD:459906 66/303 (22%)
TGF_beta_BMP8 295..399 CDD:381668 37/110 (34%)

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