DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myo and inha

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001027522.1 Gene:inha / 613114 XenbaseID:XB-GENE-853910 Length:371 Species:Xenopus tropicalis


Alignment Length:381 Identity:79/381 - (20%)
Similarity:127/381 - (33%) Gaps:128/381 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 SQMQGDDANTVNEFLIDLNKNQAKKSDIPINT-----NDEEYESILSHISSIYIFPEEIQPHVRH 344
            |:...|:...|::.::      ...||:...|     |:|..|:     |..|:|  ...||:| 
 Frog    52 SKRHQDNMEDVSQVIL------FPSSDVLCETTQTGANEEGSEN-----SFTYVF--RPSPHIR- 102

  Fly   345 NRKVDVFRF----------------QIDSSYSDLSYATLHLYLRGWDWI-----SAHQPGLLEEI 388
            .|:|...:.                .:.||.||.......|...|.|.:     :|.:|..:...
 Frog   103 TRRVSAAQLWFYTGHPAAEESAMLKNVSSSMSDQMGVEPTLETLGSDQLPPSTGAAQKPHAVTAA 167

  Fly   389 KKQPRKDIVVTI-----------HRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSLLG 442
            ......::..|:           |..:.||.|     ||:..:          .|....|.....
 Frog   168 PLDVATEVADTVGHAVDLQVLSEHEPVTVATT-----KVQRVD----------DWTVFHLAPAFL 217

  Fly   443 NLGSNMTQEILIKGAETWMKSLVV------TTDNTSKNPLTVHIEIGSQKKHRRKRS------VY 495
            ||   :|:||.:         |:|      .:|.....|.   |...:....|.:||      ..
 Frog   218 NL---VTREIFV---------LLVHCPTCPCSDQPEHTPF---ITFSTHPTQRNRRSGVPWSPSA 267

  Fly   496 MDCTE--------NDHDMRCCRYPLKVNFTSFGW-HFVVAPTSFDAYFCSGDCKVGYLEQYPHTH 551
            ::..:        :||   |.|..|.:.|...|| .::|.|.||..::|.|.|.        .||
 Frog   268 LEFLQRPPESGAGSDH---CHRGSLNITFEELGWGQWIVHPGSFQFHYCHGTCS--------PTH 321

  Fly   552 LAALTTSATP------CCS--PTKMSSLSL-LYFDDNHNLVLSVIPNMSVEGCSCS 598
                  ..||      ||:  |:.|.||.: ...|...:.....:||:..:.|:||
 Frog   322 ------GLTPALHWGHCCAALPSTMKSLRVTTTTDGGFSYRYETVPNILTQDCACS 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 27/100 (27%)
inhaNP_001027522.1 TGF_beta 284..370 CDD:306518 27/99 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.