DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myo and mstna

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001004122.1 Gene:mstna / 445816 ZFINID:ZDB-GENE-050208-735 Length:366 Species:Danio rerio


Alignment Length:423 Identity:108/423 - (25%)
Similarity:175/423 - (41%) Gaps:122/423 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 QLREKAKVDSIESIKMHILMRLNLKKLPNITK-------PISVP-QNIIDNFYRDYNASSKTTVW 253
            |.|:::|:..:.|||..||..|.|::.|||::       |.:.| |.::|.:  |.|...     
Zfish    45 QFRQQSKLLRLHSIKSQILSILRLEQAPNISRDTVKLLLPKAPPLQELLDQY--DQNGGI----- 102

  Fly   254 NRMESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTND 318
                |.||...|     .:.|:|...:..:.:|:.|                      :|     
Zfish   103 ----SEDEEQAS-----SETIITMATEPQAITQLVG----------------------MP----- 131

  Fly   319 EEYESILSHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWDWISAHQPG 383
                .......|..|.|:.|..                        |.|.:|||     .|.:| 
Zfish   132 ----KCCMFALSPKILPDSILK------------------------ALLWIYLR-----PAEEP- 162

  Fly   384 LLEEIKKQPRKDIVVTIHRAI-RVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSLL------ 441
                          .|::..| .:.:::..|...::...:..:.:....|..:|:|.||      
Zfish   163 --------------TTVYIQISHLESSSEGNNHSRIRAQKIDVNARTNSWQHIDMKQLLKLWLKQ 213

  Fly   442 --GNLGSNMTQEILIKGAETWMKSLVVTTDNTSKNPLTVHIEIG-SQKKHRRKRSVYMDCTENDH 503
              .|.|      |.||..:.....|.||:..:.:..|...:|:. |....|.:|...:||.|:..
Zfish   214 PQSNFG------IEIKAFDANGNDLAVTSTESGEEGLQPFLEVKISDTGKRSRRDTGLDCDEHST 272

  Fly   504 DMRCCRYPLKVNFTSFGWHFVVAPTSFDAYFCSGDCKVGYLEQYPHTHL---AALTTSATPCCSP 565
            :.|||||||.|:|..|||.:::||..:.|.:|||:|    :::|||:|:   |....||.|||:|
Zfish   273 ESRCCRYPLTVDFEDFGWDWIIAPKRYKANYCSGEC----VQKYPHSHIVNKANPRGSAGPCCTP 333

  Fly   566 TKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSCS 598
            ||||.:::|||:|...::...||:|.|:.|.||
Zfish   334 TKMSPINMLYFNDREQIIYGKIPSMVVDLCGCS 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 43/93 (46%)
mstnaNP_001004122.1 TGFb_propeptide 37..248 CDD:279078 56/299 (19%)
TGF_beta 275..365 CDD:278448 43/93 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 112 1.000 Domainoid score I6131
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 167 1.000 Inparanoid score I4145
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001977
OrthoInspector 1 1.000 - - otm25877
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2472
SonicParanoid 1 1.000 - - X1292
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.990

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