DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and gdf11

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_998140.1 Gene:gdf11 / 406247 ZFINID:ZDB-GENE-040427-2 Length:390 Species:Danio rerio


Alignment Length:433 Identity:110/433 - (25%)
Similarity:182/433 - (42%) Gaps:134/433 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 REKAKVDSIESIKMHILMRLNLKKLPNITK-------PISVP-QNIIDNFYRDYNASSKTTVWNR 255
            ||::||..:|:||..||.:|.||:.|||::       |.:.| |.::|:.               
Zfish    59 REQSKVLRLETIKSQILSKLRLKQAPNISREVVNQLLPKAPPLQQLLDHH--------------- 108

  Fly   256 MESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEE 320
                                 ||         || ||:::.:|:                 :.:|
Zfish   109 ---------------------DF---------QG-DASSLEDFI-----------------DADE 125

  Fly   321 YESILSHISSIYIFPEEIQPHVRHNRKVD--VFRFQIDSSYSDLSYATLHLYLRGWDWISAHQPG 383
            |.:.   ..|:.....|.:|.|:.:.|..  .|:|.....::.:..|.|.:||            
Zfish   126 YHAT---TESVITMASEPEPLVQVDGKPTCCFFKFSPKLMFTKVLKAQLWVYL------------ 175

  Fly   384 LLEEIKKQPRKDIVVTIHRAIRVANTTSFNPK-VKMFEFRHSIPSGLGQWVAVDLKSLLGNLGSN 447
                   ||.|.......:.:|:...|....: :::...:..:.|..|.|.::|.|.:|.|    
Zfish   176 -------QPLKQTSTVYLQILRLKPITEQGSRHIRIRSLKIELDSQAGHWQSIDFKHVLQN---- 229

  Fly   448 MTQEILIKGAETWMK------------------SLVVTTDNTSKNPLTVHIEIG-SQKKHRRKRS 493
                        |.|                  .|.||:....:..|...:|:. .:...|.:|:
Zfish   230 ------------WFKQPHTNWGIDINAYDESGNDLAVTSLGPGEEGLQPFLEVKILETTKRSRRN 282

  Fly   494 VYMDCTENDHDMRCCRYPLKVNFTSFGWHFVVAPTSFDAYFCSGDCKVGYLEQYPHTHL---AAL 555
            :.:||.|:..:.|||||||.|:|.:|||.:::||..:.|.:|||.|:..::::||||||   |..
Zfish   283 LGLDCDEHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGQCEYMFMQKYPHTHLVQHANP 347

  Fly   556 TTSATPCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSCS 598
            ..||.|||:|||||.:::|||:|...::...||.|.|:.|.||
Zfish   348 RGSAGPCCTPTKMSPINMLYFNDKQQIIHGKIPGMVVDRCGCS 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 45/93 (48%)
gdf11NP_998140.1 TGFb_propeptide 52..268 CDD:480997 57/309 (18%)
TGF_beta_GDF8 284..390 CDD:381658 48/105 (46%)

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