DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and gbb

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster


Alignment Length:534 Identity:103/534 - (19%)
Similarity:200/534 - (37%) Gaps:151/534 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 KNGSSSISADDKINENMGIFQMKVQSKPGKKSTPLAKVSEHGDLSRVQSVSLYRNTLINIESMLQ 195
            :|.|.:::....:...|.:......:.|..::|......::|                ..::::.
  Fly     5 RNTSEAVAVLASLGLGMVLLMFVATTPPAVEATQSGIYIDNG----------------KDQTIMH 53

  Fly   196 RQLREKAKVDSIESIKMHILMRLNLKKLP------NITKPISVPQNIIDNFYRDYNASSKTTVWN 254
            |.|.|..|:|    :...||..|.:.:.|      .::...|.|:.::|.::| ..|....:..:
  Fly    54 RVLSEDDKLD----VSYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYHR-ITAEEGLSDQD 113

  Fly   255 RMESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDE 319
            ..:..:..|.|                ..|:.::.|:......|:.||:|....:|||.:...::
  Fly   114 EDDDYERGHRS----------------RRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLNK 162

  Fly   320 EYESI--LSHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSD--LSYATLHLYLRGWD--WIS 378
            .:.::  |.|               .|.|::   .|.:.:..:|  |..|.|.:|....:  |::
  Fly   163 RHHNVDELRH---------------EHGRRL---WFDVSNVPNDNYLVMAELRIYQNANEGKWLT 209

  Fly   379 AHQ----------PGLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWV 433
            |::          .|.|.:...:|...:           |||  ...|...|.  ::..||.:|:
  Fly   210 ANREFTITVYAIGTGTLGQHTMEPLSSV-----------NTT--GDYVGWLEL--NVTEGLHEWL 259

  Fly   434 --------------AV---DLKSLLGNLG------SNMTQEILI---KGAETWMKSLVVTTDNTS 472
                          ||   |.:..|.::|      .:..|..:|   :|.|. :|:...::.:.|
  Fly   260 VKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPEL-IKATAHSSHHRS 323

  Fly   473 KNPLTVHIEIGSQKKHRRKRSVY---------MDCTENDHDMRCCRYPLKVNFTSFGWH-FVVAP 527
            |.        .:....:||:||.         |:.|.:     |....|.::|...||| :::||
  Fly   324 KR--------SASHPRKRKKSVSPNNVPLLEPMESTRS-----CQMQTLYIDFKDLGWHDWIIAP 375

  Fly   528 TSFDAYFCSGDCKV---GYLEQYPH------THLAALTTSATPCCSPTKMSSLSLLYFDDNHNLV 583
            ..:.|::|||:|..   .::....|      .||........|||:||::.:|.:||..::.|:.
  Fly   376 EGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVN 440

  Fly   584 LSVIPNMSVEGCSC 597
            |....||.|:.|.|
  Fly   441 LKKYRNMIVKSCGC 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 30/100 (30%)
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 56/329 (17%)
TGF_beta_BMP5_like 353..455 CDD:381639 31/107 (29%)

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