DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and tgfb2

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_919366.1 Gene:tgfb2 / 369194 ZFINID:ZDB-GENE-030723-3 Length:411 Species:Danio rerio


Alignment Length:488 Identity:105/488 - (21%)
Similarity:177/488 - (36%) Gaps:151/488 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 DLSRVQSVSLYRNTLINIESMLQRQLREKAKVDSIESIKMHILMRLNLKKLPNI-TKPISVPQNI 236
            ||:.| :|||...:.::::     |.::|    .||:|:..||.:|.|...|.| .:|..|.:.|
Zfish    13 DLAAV-AVSLSTCSTVDMD-----QFKKK----RIEAIRGQILSKLKLSSPPEIYPEPEEVSRGI 67

  Fly   237 ID--NFYRDY---NASSKTTVWNRMESIDE-----------------SHLSINDTYGDHIMTDFF 279
            |.  |..||.   .|:.:.....|..|.:|                 .::.::..|..:.....|
Zfish    68 IAIYNSTRDLLQEKANERAATCERQRSEEEYYAKEVHKIDMQPFYPSENVILSQHYYPYFRRLMF 132

  Fly   280 DESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEEYESILSHISSIYIFPEEIQPHVRH 344
            |.||   |:.:.:|.|.                                :.:.||  .:|     
Zfish   133 DVSS---MEKNASNLVK--------------------------------AQLRIF--RLQ----- 155

  Fly   345 NRKVDVFRFQID----SSYSDLSYATLHLYLRG--------WDWISAHQPGLLEE--IKKQPRKD 395
            |.|..||..:|:    ..:.||:..| ..|:..        .:|:|......:.|  :.:...|.
Zfish   156 NPKARVFEQRIELYQVLGHKDLTSPT-QRYINSKVVRTRTEGEWLSFDVTEAVSEWLLHRDRNKG 219

  Fly   396 IVVTIHRAIRVANTTSFNP--------KVKMFEFRHS------IPSGLGQWVAVDLKSLLGNLGS 446
            ..:::|     ....:|.|        |.:..|.|.:      :..|       |||.......|
Zfish   220 FKISLH-----CPCCTFVPSNNYIIPNKSEELETRFAGIDDSFVNGG-------DLKMFKKRRHS 272

  Fly   447 NMTQEILIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQ-KKHRRKRSVYMD---CTENDHDMRC 507
            ..:..:|:.                    |.....:.|| |.||:||:  :|   |:.|..|.||
Zfish   273 GQSPHLLLM--------------------LLPSYRLESQHKSHRQKRA--LDTAFCSRNVQDNRC 315

  Fly   508 CRYPLKVNF-TSFGWHFVVAPTSFDAYFCSGDCKVGYLEQYPHTHLAAL------TTSATPCCSP 565
            .| .|.::| ...||.::..|..::|.||:|.|...:.....|:::..|      ..||:|||..
Zfish   316 LR-SLYIDFKKDLGWRWIHEPKGYNANFCAGACPYLWSADTQHSNILGLYNTINPEASASPCCVS 379

  Fly   566 TKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSCS 598
            ..:..|::||: ......:..:.||.|:.|.||
Zfish   380 QDLEPLTILYY-IGKTPKIEQLSNMIVKSCKCS 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 27/97 (28%)
tgfb2NP_919366.1 TGFb_propeptide 21..228 CDD:366248 48/263 (18%)
TGF_beta_TGFB2 314..410 CDD:381655 27/97 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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