DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myo and daw

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster


Alignment Length:639 Identity:127/639 - (19%)
Similarity:242/639 - (37%) Gaps:201/639 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RKYKTHDQHHRTLKKKTRQNTSDTTVHIEVNSNEIQFPGSYRFNLDSKKINIGRMNILGHKRGNF 74
            |::..|.:.| .|:::...|      |...:|.:::.|..::..::.::                
  Fly    97 RRHVIHKRQH-LLQQELSYN------HPGSHSEQLKVPRLWQHLMEQEE---------------- 138

  Fly    75 RVTRYVTVTVLLILSTAVNAYAQ-PENKSFSNSSNND--SPEMVMLSNETNNSAKVLSEKNGSSS 136
            :..|:|:..|.|.:     .|.. ||..|.|:..:.|  || :..:.||                
  Fly   139 KAHRHVSPPVELPI-----MYGDAPEESSLSSDDHFDDLSP-LDFVRNE---------------- 181

  Fly   137 ISADDKINENMGI-FQMKVQSKP----------GKKSTPLAKVSEHGDLSRVQSVSLYRNTLINI 190
            :.|:|:.|:...: ..:.:..:|          |:::..::..|..|...:.:|..       .:
  Fly   182 LMAEDQQNQEKDLDLDLDLDQQPETPIEPELPLGERNITISVKSSAGGCPKCESNR-------QV 239

  Fly   191 ESMLQRQLREKAKVDSIESIKMHILMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNR 255
            |.:.:.||...    .||.:|..||.:|.||:.|.:: .:.:|:.|.|.                
  Fly   240 EHITEEQLTHL----RIEFVKQQILEKLRLKESPKVS-AVELPKPIFDG---------------- 283

  Fly   256 MESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDD--ANTVNEFLIDLNKNQAKKSDIPINTND 318
                               ||....:.|:...:.||  |.|..:|::               .|.
  Fly   284 -------------------MTLSHPDDSTKNKELDDYYARTSKKFIL---------------LNR 314

  Fly   319 EEYESILSHISSIYIFPEEIQPHVRHNRKVD-------VFRFQIDSSYS---DLSYATLHLY--- 370
            ||.|.                     ||..|       .|.|:||.:.:   |:|.|.|.|:   
  Fly   315 EEVEC---------------------NRARDGKSNPSMCFTFKIDDADAEGFDVSTAVLWLFKNK 358

  Fly   371 -----LRGWDWISAHQPGLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLG 430
                 ....:..||.|..::.|::...:||     .:.:..|.|.:.. .|.:.:          
  Fly   359 QNRTDTASVNSTSAQQTIVVSEVEVDQQKD-----SKYLSAAKTIAIQ-SVNVQD---------- 407

  Fly   431 QWVAVDLK-----SLLGNLGSNMTQEILIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQKKHRR 490
            :|:.:|::     .:.|:..|::.| |...|.:......:::.|...:..:.:.:: ..::|.|:
  Fly   408 EWMKIDIEWPIKHWISGHELSHLIQ-ITCGGCDVSDMEEIISVDKDYRPFIVIDMQ-NRRRKSRQ 470

  Fly   491 KRSVYMDCTENDHDMRCCRYPLKVNFTSFGW-HFVVAPTSFDAYFCSGDC-KVGYLEQYPHTH-- 551
            |||:  :|:....:  |||..|.::|...|| ::::.|..::||||.|.| .|..:.|....|  
  Fly   471 KRSI--NCSSGMTE--CCREHLYISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSS 531

  Fly   552 -LAALTTSA-------TPCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSC 597
             :..|:||.       .|||:..:.|||.|:..|.::...:..:|||.||.|.|
  Fly   532 IMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGC 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 34/102 (33%)
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 55/306 (18%)
TGF_beta 481..585 CDD:278448 34/105 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471853
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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