DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myo and dpp

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster


Alignment Length:610 Identity:125/610 - (20%)
Similarity:220/610 - (36%) Gaps:167/610 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 TRYVTVTVLLILSTAVNAYAQPENKSFSNS------------SNNDS---------PEMVMLSNE 120
            :|.|..:....|:.|.|.:::|  .|||:|            |.:|:         |....|.|.
  Fly    56 SRSVGASTSTALAKAFNPFSEP--ASFSDSDKSHRSKTNKKPSKSDANRQFNEVHKPRTDQLENS 118

  Fly   121 TNNSAKVLSEKNGSSSISADDKINENMGIFQMKVQSKPGKKSTPLAKVSEHGDLSRVQSVSLYRN 185
            .|.|.:::::.|.:.....:.:.:..........|.|....||      |....|.::|:.:...
  Fly   119 KNKSKQLVNKPNHNKMAVKEQRSHHKKSHHHRSHQPKQASAST------ESHQSSSIESIFVEEP 177

  Fly   186 TLI------------NIESMLQRQ----------LREKAKVD--SIESIKMHILMRLNLKKLPNI 226
            ||:            |.::::..|          :::|.|.|  ::..|:..:|...|:|:.|.|
  Fly   178 TLVLDREVASINVPANAKAIIAEQGPSTYSKEALIKDKLKPDPSTLVEIEKSLLSLFNMKRPPKI 242

  Fly   227 TK-PISVPQ-------NIIDNFYRDYNASSK---TTVWNRMESIDESHLSINDTYGDHIMTDF-F 279
            .: .|.:|:       .|:.:.....|....   |...|.:.|.......|:|.:..|..... |
  Fly   243 DRSKIIIPEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHF 307

  Fly   280 DESSSSQMQGDDANTVNEFLI--DLNKNQ--AKKSDIPINTNDEEYESILSHISSIYIFPEEIQP 340
            |..|   :..|:.....|..:  |....|  |.:|    :.|...|:.::..|:.:.:       
  Fly   308 DVKS---IPADEKLKAAELQLTRDALSQQVVASRS----SANRTRYQVLVYDITRVGV------- 358

  Fly   341 HVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWD------------WISAHQP--GLLEEIKK- 390
                       |.|.:.||..|...|:.  |...|            |:::.|.  |||.|::. 
  Fly   359 -----------RGQREPSYLLLDTKTVR--LNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTV 410

  Fly   391 ---QPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSLLGNLGSNMTQEI 452
               :|.....|.:.|:...|:....:.:..:|.:...     |:..|..::.             
  Fly   411 RSLKPAPHHHVRLRRSADEAHERWQHKQPLLFTYTDD-----GRHKARSIRD------------- 457

  Fly   453 LIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQKKHRRKRSVYMDCTENDHDMRCCRYPLKVNFT 517
             :.|.|                        |..|..|.||.........:||..|.|:.|.|:|:
  Fly   458 -VSGGE------------------------GGGKGGRNKRQPRRPTRRKNHDDTCRRHSLYVDFS 497

  Fly   518 SFGW-HFVVAPTSFDAYFCSGDCKVGYLEQYPHTHLAALTT---SATP------CCSPTKMSSLS 572
            ..|| .::|||..:|||:|.|.|.....:.:..|:.|.:.|   :..|      ||.||::.|::
  Fly   498 DVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVA 562

  Fly   573 LLYFDDNHNLVLSVIPNMSVEGCSC 597
            :||.:|...:||.....|:|.||.|
  Fly   563 MLYLNDQSTVVLKNYQEMTVVGCGC 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 34/100 (34%)
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 47/245 (19%)
TGFB 487..588 CDD:214556 35/101 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466517
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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