DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and inhbb

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_571143.2 Gene:inhbb / 30275 ZFINID:ZDB-GENE-990415-2 Length:393 Species:Danio rerio


Alignment Length:427 Identity:106/427 - (24%)
Similarity:169/427 - (39%) Gaps:124/427 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 DSIESIKMHILMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNRME--SIDESHLSIN 267
            |.:|::|.|||.||.:::.||||.||  |:..:....|..:| .|.....|:|  ::| .|.:.|
Zfish    58 DFLEAVKRHILNRLQMRERPNITHPI--PKAAMVTALRKLHA-GKVREDGRVEIPNLD-GHAAHN 118

  Fly   268 DTYGDHIMTDFFDESSS--SQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEEYESILSHISS 330
            :..         :|:|.  |..:.||.......|..|..|:..:                    :
Zfish   119 EVQ---------EETSEIISFAESDDVTPSKSSLYFLISNEGNQ--------------------N 154

  Fly   331 IYIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWDWISAHQPGLLEEIKKQPRKD 395
            :|:.                             .|.|.||.:       ..||.||   |..|:.
Zfish   155 LYVL-----------------------------QANLWLYFK-------LMPGTLE---KGLRRK 180

  Fly   396 IVVTIHRAIRVANTTSFNPKVK-----MFEFR--------HSIPSGLGQWVAVDLKSLLGNLGSN 447
            :.|.:|         |:.|..:     |.|.|        |:.|      |:..::.:|...|..
Zfish   181 VTVRVH---------SYEPGGQNVHWPMMEKRVELKRSGWHTFP------VSEAIREMLAKGGRR 230

  Fly   448 MTQEILIKGAETW-MKSLVVTTDNTSKNPLTVHIEIGSQKKHR-RKRSVYMDCTENDHDMRCCRY 510
            ...:|..:|.|.. :..::|...:.|..|..|.....:..||| |||.  ::|..|:..: |||.
Zfish   231 QDLDIHCEGCEAANVLPILVDPSDPSHRPFLVVRAQQADGKHRIRKRG--LECDGNNGGL-CCRQ 292

  Fly   511 PLKVNFTSFGWH-FVVAPTSFDAYFCSGDCKVGYLEQYPHT----HLAALTT---------SATP 561
            ...::|...||: :::||..:...:|.|.|. .|:...|.:    |.|.:..         |...
Zfish   293 QFYIDFRLIGWNDWIIAPAGYYGNYCEGSCP-AYMAGVPGSASSFHTAVVNQYRMRGMSPGSVNS 356

  Fly   562 CCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSCS 598
            ||.|||:|::|:|||||.:|:|...:|||.||.|.|:
Zfish   357 CCIPTKLSTMSMLYFDDEYNIVKRDVPNMIVEECGCA 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 36/104 (35%)
inhbbNP_571143.2 TGFb_propeptide 54..263 CDD:279078 60/291 (21%)
TGFB 289..392 CDD:214556 36/103 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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