DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Mstn

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_062024.1 Gene:Mstn / 29152 RGDID:3115 Length:376 Species:Rattus norvegicus


Alignment Length:420 Identity:115/420 - (27%)
Similarity:181/420 - (43%) Gaps:109/420 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 REKAKVDSIESIKMHILMRLNLKKLPNITK-------PISVP-QNIIDNFYRDYNASSKTTVWNR 255
            |:..:...||:||:.||.:|.|:..|||:|       |.:.| :.:||.:               
  Rat    46 RQNTRYSRIEAIKIQILSKLRLETAPNISKDAIRQLLPRAPPLRELIDQY--------------- 95

  Fly   256 MESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEE 320
                |...                |:||...::.||.:...|.:|.:    ..:||         
  Rat    96 ----DVQR----------------DDSSDGSLEDDDYHATTETIITM----PTESD--------- 127

  Fly   321 YESILSHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWDWISAHQPGLL 385
                       ::...:.:|      |...|:|.....|:.:..|.|.:|||.....:.....:|
  Rat   128 -----------FLMQADGKP------KCCFFKFSSKIQYNKVVKAQLWIYLRAVKTPTTVFVQIL 175

  Fly   386 EEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSLL--------G 442
            ..||  |.||  .|.:..||              ..:..:..|.|.|.::|:|::|        .
  Rat   176 RLIK--PMKD--GTRYTGIR--------------SLKLDMSPGTGIWQSIDVKTVLQNWLKQPES 222

  Fly   443 NLGSNMTQEILIKGAETWMKSLVVTTDNTSKNPLTVHIEIG-SQKKHRRKRSVYMDCTENDHDMR 506
            |||      |.||..:.....|.||.....::.|...:|:. :....|.:|...:||.|:..:.|
  Rat   223 NLG------IEIKALDENGHDLAVTFPGPGEDGLNPFLEVKVTDTPKRSRRDFGLDCDEHSTESR 281

  Fly   507 CCRYPLKVNFTSFGWHFVVAPTSFDAYFCSGDCKVGYLEQYPHTHL---AALTTSATPCCSPTKM 568
            ||||||.|:|.:|||.:::||..:.|.:|||:|:..:|::||||||   |....||.|||:||||
  Rat   282 CCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPRGSAGPCCTPTKM 346

  Fly   569 SSLSLLYFDDNHNLVLSVIPNMSVEGCSCS 598
            |.:::|||:....::...||.|.|:.|.||
  Rat   347 SPINMLYFNGKEQIIYGKIPAMVVDRCGCS 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 45/93 (48%)
MstnNP_062024.1 TGFb_propeptide 37..250 CDD:413528 61/292 (21%)
TGF_beta_GDF8 269..376 CDD:381658 48/106 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 113 1.000 Domainoid score I5990
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3850
Inparanoid 1 1.050 159 1.000 Inparanoid score I4163
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001977
OrthoInspector 1 1.000 - - otm45617
orthoMCL 1 0.900 - - OOG6_105895
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1292
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.860

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